PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG063510.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LFY
Protein Properties Length: 392aa    MW: 42651.4 Da    PI: 9.1242
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG063510.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY5377.2e-16413761385
           FLO_LFY   1 mdpea..fsaslfkwd...praaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeeldd 88 
                       mdp++  ++a+ f+wd   p+      pa + +    +++     a   a++ rele+l+ +yGvr +tva+i+elGft+stL+ m+++eldd
  TRIDC2AG063510.2   1 MDPNDafLAAHPFRWDlgpPA------PAAVPPPPPPPPP---PPALPPANAPRELEDLVVGYGVRASTVARISELGFTASTLLVMTERELDD 84 
                       777665346779****44322......2223222222222...2345566779**************************************** PP

           FLO_LFY  89 lmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekks 181
                       ++++l+ +fr+dll+Ger+G++aa+raer rl++      r++    ++ +++d +sqe+ls+e++      a+sgg g+ +a  ++a+ kk+
  TRIDC2AG063510.2  85 MTAALAGLFRWDLLIGERFGLRAALRAERGRLMSPG---CRHH--GYQSGSTIDGASQEVLSNERD-----GAASGGIGEDDAMRMMASGKKQ 167
                       *********************************955...5555..5677889***********987.....4566666655555554444444 PP

           FLO_LFY 182 eeekkkaskkkqkrkkkkelkse.....ededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqki 269
                       ++ +  +++kk++r+k kel+ +     +++    ++++ e+++g  g erqrehPf+vtepgevar+kknGLDYLf+LyeqCr fLlqvq++
  TRIDC2AG063510.2 168 KNGSAARKAKKARRNKVKELRLDtqgdeHEDGGGGRSESTESSAGGVGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEQCRLFLLQVQSM 260
                       4444444445677777777666543332222223445666667888899******************************************** PP

           FLO_LFY 270 akerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnah 362
                       ak +G+k+Ptkvtnqvfrya k+gasyinkPkmrhYvhCYalhcLde+as+alrra+k+rgenvGawrqacy+plv+iaar+g+didavf+ah
  TRIDC2AG063510.2 261 AKLHGQKSPTKVTNQVFRYASKVGASYINKPKMRHYVHCYALHCLDEDASDALRRAYKARGENVGAWRQACYAPLVDIAARHGFDIDAVFAAH 353
                       ********************************************************************************************* PP

           FLO_LFY 363 prLsiWYvPtkLrqLChlerska 385
                       prL+iWYvPt+LrqLCh++rs++
  TRIDC2AG063510.2 354 PRLAIWYVPTRLRQLCHQARSAH 376
                       ********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MDPNDAFLAA HPFRWDLGPP APAAVPPPPP PPPPPPALPP ANAPRELEDL VVGYGVRAST  60
VARISELGFT ASTLLVMTER ELDDMTAALA GLFRWDLLIG ERFGLRAALR AERGRLMSPG  120
CRHHGYQSGS TIDGASQEVL SNERDGAASG GIGEDDAMRM MASGKKQKNG SAARKAKKAR  180
RNKVKELRLD TQGDEHEDGG GGRSESTESS AGGVGGERQR EHPFVVTEPG EVARAKKNGL  240
DYLFHLYEQC RLFLLQVQSM AKLHGQKSPT KVTNQVFRYA SKVGASYINK PKMRHYVHCY  300
ALHCLDEDAS DALRRAYKAR GENVGAWRQA CYAPLVDIAA RHGFDIDAVF AAHPRLAIWY  360
VPTRLRQLCH QARSAHDAAA AAHAGAMPPP MF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-96LFY family protein