PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG063510.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LFY
Protein Properties Length: 396aa    MW: 43097.9 Da    PI: 8.9308
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG063510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY534.15.3e-16313801385
           FLO_LFY   1 mdpea..fsaslfkwd...praaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeeldd 88 
                       mdp++  ++a+ f+wd   p+      pa + +    +++     a   a++ rele+l+ +yGvr +tva+i+elGft+stL+ m+++eldd
  TRIDC2AG063510.1   1 MDPNDafLAAHPFRWDlgpPA------PAAVPPPPPPPPP---PPALPPANAPRELEDLVVGYGVRASTVARISELGFTASTLLVMTERELDD 84 
                       777665346779****44322......2223222222222...2345566779**************************************** PP

           FLO_LFY  89 lmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekks 181
                       ++++l+ +fr+dll+Ger+G++aa+raer rl++      r++    ++ +++d +sqeg      ++e++ a+sgg g+ +a  ++a+ kk+
  TRIDC2AG063510.1  85 MTAALAGLFRWDLLIGERFGLRAALRAERGRLMSPG---CRHH--GYQSGSTIDGASQEGDYPL-LSNERDGAASGGIGEDDAMRMMASGKKQ 171
                       *********************************955...5555..5677889********6554.4456778888888766666665555554 PP

           FLO_LFY 182 eeekkkaskkkqkrkkkkelkse.....ededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqki 269
                       ++ +  +++kk++r+k kel+ +     +++    ++++ e+++g  g erqrehPf+vtepgevar+kknGLDYLf+LyeqCr fLlqvq++
  TRIDC2AG063510.1 172 KNGSAARKAKKARRNKVKELRLDtqgdeHEDGGGGRSESTESSAGGVGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEQCRLFLLQVQSM 264
                       4444444455777777777766644332222223345666667888899******************************************** PP

           FLO_LFY 270 akerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnah 362
                       ak +G+k+Ptkvtnqvfrya k+gasyinkPkmrhYvhCYalhcLde+as+alrra+k+rgenvGawrqacy+plv+iaar+g+didavf+ah
  TRIDC2AG063510.1 265 AKLHGQKSPTKVTNQVFRYASKVGASYINKPKMRHYVHCYALHCLDEDASDALRRAYKARGENVGAWRQACYAPLVDIAARHGFDIDAVFAAH 357
                       ********************************************************************************************* PP

           FLO_LFY 363 prLsiWYvPtkLrqLChlerska 385
                       prL+iWYvPt+LrqLCh++rs++
  TRIDC2AG063510.1 358 PRLAIWYVPTRLRQLCHQARSAH 380
                       ********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MDPNDAFLAA HPFRWDLGPP APAAVPPPPP PPPPPPALPP ANAPRELEDL VVGYGVRAST  60
VARISELGFT ASTLLVMTER ELDDMTAALA GLFRWDLLIG ERFGLRAALR AERGRLMSPG  120
CRHHGYQSGS TIDGASQEGD YPLLSNERDG AASGGIGEDD AMRMMASGKK QKNGSAARKA  180
KKARRNKVKE LRLDTQGDEH EDGGGGRSES TESSAGGVGG ERQREHPFVV TEPGEVARAK  240
KNGLDYLFHL YEQCRLFLLQ VQSMAKLHGQ KSPTKVTNQV FRYASKVGAS YINKPKMRHY  300
VHCYALHCLD EDASDALRRA YKARGENVGA WRQACYAPLV DIAARHGFDI DAVFAAHPRL  360
AIWYVPTRLR QLCHQARSAH DAAAAAHAGA MPPPMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.12e-96LFY family protein