PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG063470.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 467aa MW: 51980.1 Da PI: 5.1179

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG063470.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33	1.1e-10	266	312	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +a+ + Er RR+++N ++ +Lr l P++ +K++ a+++ A+eYI +L TRIDC2AG063470.3 266 KANFATERERREQLNVKYKTLRMLFPNP-----TKNDRASVVGDAIEYIDEL 312 68899*********************.....9*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MIVGGDYFEG SHDHNLMTGS LTHDSSLAPK CNDNTNIELQ RFKVQSFSAD ILSDSTNLSS 60 EAARAINHLQ HQLGIGLEQD MRPVETATWD TSICTIQDQI INHQLSEDPQ NILVQQQIQQ 120 YDPALYPNSG YTPAPDLLNL LHCTVAPVFP ATASVFGDTA LSGGTNYLDL NGEFTGVAAI 180 PDSGLMYTSD PALQLGYHAA QSHALNDICH SLPQNYGLFP SEDERDAMLG VGSVGGDLFQ 240 DMDDRQFDTV LEGRRGKGEF GKGKGKANFA TERERREQLN VKYKTLRMLF PNPTKNDRAS 300 VVGDAIEYID ELNRTVKELK ILVEQKWHGT NRRKIRKLDE EAAADGESSS MRPIRDEQDN 360 QLDGAIRSSW VQRRSRECHV DVRIVENEIN IKLTEKKKTN SSLLHVAKVL DEFHLEIIHV 420 VGGIIGDHYI FMFNTKVSEG SSIYACAVAK RILQAVDAQH QALDIFN

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MIVGGDYFEG SHDHNLMTGS LTHDSSLAPK CNDNTNIELQ RFKVQSFSAD ILSDSTNLSS  60
EAARAINHLQ HQLGIGLEQD MRPVETATWD TSICTIQDQI INHQLSEDPQ NILVQQQIQQ  120
YDPALYPNSG YTPAPDLLNL LHCTVAPVFP ATASVFGDTA LSGGTNYLDL NGEFTGVAAI  180
PDSGLMYTSD PALQLGYHAA QSHALNDICH SLPQNYGLFP SEDERDAMLG VGSVGGDLFQ  240
DMDDRQFDTV LEGRRGKGEF GKGKGKANFA TERERREQLN VKYKTLRMLF PNPTKNDRAS  300
VVGDAIEYID ELNRTVKELK ILVEQKWHGT NRRKIRKLDE EAAADGESSS MRPIRDEQDN  360
QLDGAIRSSW VQRRSRECHV DVRIVENEIN IKLTEKKKTN SSLLHVAKVL DEFHLEIIHV  420
VGGIIGDHYI FMFNTKVSEG SSIYACAVAK RILQAVDAQH QALDIFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	1e-44	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG063470.3