PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG062550.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 378aa MW: 41738.2 Da PI: 7.7239

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG062550.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.6e-24	114	158	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC2AG062550.5 114 DPEPGRCRRTDGKKWRCSKEAAQDSKYCERHMHRGRNRSRKPVET 158 79****************************************997 PP
2	QLQ	59.1	1.3e-20	53	88	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll++i++ TRIDC2AG062550.5 53 TFTAAQYEELEQQALIYKYLVAGVPVPPDLLLPIRR 88 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
AMPFASLSPA ADHHRSSPIF PFCRSSPLYS AQQQQQQQHA MSGARWAAAR PATFTAAQYE 60 ELEQQALIYK YLVAGVPVPP DLLLPIRRGF DSLASRFYHH HALGYGSYFG KKLDPEPGRC 120 RRTDGKKWRC SKEAAQDSKY CERHMHRGRN RSRKPVETQL VSHSQQLQQQ APAAAFHGHS 180 PYPAIATGAG APGSFALGST AQLHMDNAAA PYATAGAAGN KDFRYSAYGF RTSAMEDHNQ 240 FISAAMDTAM DNYSWRLLPA QNSSFSLSSY PMLSTLSDLD QSAICSLAKT EREPLSFFGV 300 GGGFDDDESA VKQENQTLRP FFDEWPKDRD SWPELQDHDS NHNNEAFSAT KLSISIPVTS 360 SDFSTTAGSR SPHGIYSR

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

AMPFASLSPA ADHHRSSPIF PFCRSSPLYS AQQQQQQQHA MSGARWAAAR PATFTAAQYE  60
ELEQQALIYK YLVAGVPVPP DLLLPIRRGF DSLASRFYHH HALGYGSYFG KKLDPEPGRC  120
RRTDGKKWRC SKEAAQDSKY CERHMHRGRN RSRKPVETQL VSHSQQLQQQ APAAAFHGHS  180
PYPAIATGAG APGSFALGST AQLHMDNAAA PYATAGAAGN KDFRYSAYGF RTSAMEDHNQ  240
FISAAMDTAM DNYSWRLLPA QNSSFSLSSY PMLSTLSDLD QSAICSLAKT EREPLSFFGV  300
GGGFDDDESA VKQENQTLRP FFDEWPKDRD SWPELQDHDS NHNNEAFSAT KLSISIPVTS  360
SDFSTTAGSR SPHGIYSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG062550.5