PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG062550.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 383aa MW: 42195.7 Da PI: 7.269

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG062550.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.6e-24	119	163	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC2AG062550.4 119 DPEPGRCRRTDGKKWRCSKEAAQDSKYCERHMHRGRNRSRKPVET 163 79****************************************997 PP
2	QLQ	59	1.4e-20	58	93	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll++i++ TRIDC2AG062550.4 58 TFTAAQYEELEQQALIYKYLVAGVPVPPDLLLPIRR 93 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
AMPFASLSPA ADHHRSSPIF PFCRSSPLYS AGEEAAQQQQ QQQHAMSGAR WAAARPATFT 60 AAQYEELEQQ ALIYKYLVAG VPVPPDLLLP IRRGFDSLAS RFYHHHALGY GSYFGKKLDP 120 EPGRCRRTDG KKWRCSKEAA QDSKYCERHM HRGRNRSRKP VETQLVSHSQ QLQQQAPAAA 180 FHGHSPYPAI ATGAGAPGSF ALGSTAQLHM DNAAAPYATA GAAGNKDFRY SAYGFRTSAM 240 EDHNQFISAA MDTAMDNYSW RLLPAQNSSF SLSSYPMLST LSDLDQSAIC SLAKTEREPL 300 SFFGVGGGFD DDESAVKQEN QTLRPFFDEW PKDRDSWPEL QDHDSNHNNE AFSATKLSIS 360 IPVTSSDFST TAGSRSPHGI YSR

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

AMPFASLSPA ADHHRSSPIF PFCRSSPLYS AGEEAAQQQQ QQQHAMSGAR WAAARPATFT  60
AAQYEELEQQ ALIYKYLVAG VPVPPDLLLP IRRGFDSLAS RFYHHHALGY GSYFGKKLDP  120
EPGRCRRTDG KKWRCSKEAA QDSKYCERHM HRGRNRSRKP VETQLVSHSQ QLQQQAPAAA  180
FHGHSPYPAI ATGAGAPGSF ALGSTAQLHM DNAAAPYATA GAAGNKDFRY SAYGFRTSAM  240
EDHNQFISAA MDTAMDNYSW RLLPAQNSSF SLSSYPMLST LSDLDQSAIC SLAKTEREPL  300
SFFGVGGGFD DDESAVKQEN QTLRPFFDEW PKDRDSWPEL QDHDSNHNNE AFSATKLSIS  360
IPVTSSDFST TAGSRSPHGI YSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG062550.4