PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG062550.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 388aa MW: 42788.4 Da PI: 7.4395

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG062550.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.5	2.7e-24	124	168	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC2AG062550.3 124 DPEPGRCRRTDGKKWRCSKEAAQDSKYCERHMHRGRNRSRKPVET 168 79****************************************997 PP
2	QLQ	59	1.4e-20	63	98	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll++i++ TRIDC2AG062550.3 63 TFTAAQYEELEQQALIYKYLVAGVPVPPDLLLPIRR 98 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MAMPFASLSP AADHHRSSPI FPFCRSSPLY SCVCRAGEEA AQQQQQQQHA MSGARWAAAR 60 PATFTAAQYE ELEQQALIYK YLVAGVPVPP DLLLPIRRGF DSLASRFYHH HALGYGSYFG 120 KKLDPEPGRC RRTDGKKWRC SKEAAQDSKY CERHMHRGRN RSRKPVETQL VSHSQQLQQQ 180 APAAAFHGHS PYPAIATGAG APGSFALGST AQLHMDNAAA PYATAGAAGN KDFRYSAYGF 240 RTSAMEDHNQ FISAAMDTAM DNYSWRLLPA QNSSFSLSSY PMLSTLSDLD QSAICSLAKT 300 EREPLSFFGV GGGFDDDESA VKQENQTLRP FFDEWPKDRD SWPELQDHDS NHNNEAFSAT 360 KLSISIPVTS SDFSTTAGSR SPHGIYSR

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MAMPFASLSP AADHHRSSPI FPFCRSSPLY SCVCRAGEEA AQQQQQQQHA MSGARWAAAR  60
PATFTAAQYE ELEQQALIYK YLVAGVPVPP DLLLPIRRGF DSLASRFYHH HALGYGSYFG  120
KKLDPEPGRC RRTDGKKWRC SKEAAQDSKY CERHMHRGRN RSRKPVETQL VSHSQQLQQQ  180
APAAAFHGHS PYPAIATGAG APGSFALGST AQLHMDNAAA PYATAGAAGN KDFRYSAYGF  240
RTSAMEDHNQ FISAAMDTAM DNYSWRLLPA QNSSFSLSSY PMLSTLSDLD QSAICSLAKT  300
EREPLSFFGV GGGFDDDESA VKQENQTLRP FFDEWPKDRD SWPELQDHDS NHNNEAFSAT  360
KLSISIPVTS SDFSTTAGSR SPHGIYSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	9e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG062550.3