PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG060820.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 239aa    MW: 27770 Da    PI: 8.8605
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG060820.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.21.7e-26959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      k+ien++ rqvtfskRr g+lKKA+EL +LCda+v vi+fs +gk+yey+s
  TRIDC2AG060820.2  9 KKIENTTSRQVTFSKRRMGLLKKANELAILCDAQVGVIVFSGSGKMYEYAS 59
                      68***********************************************86 PP
2K-box51.35.1e-18851611491
             K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 
                       +++  +e++++k+e + L+   R+++GedL+sL+l++  +Leqq+e sl k+R +K +ll +q+ e++++e  ++e++
  TRIDC2AG060820.2  85 QQKIIHEMTRMKDESNRLKIIMRQYMGEDLGSLTLQDVSNLEQQIEFSLYKVRLRK-QLLDQQLLEMRQREMHMSEDQ 161
                       678889************************************************98.79*************999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MGRGKVELKK IENTTSRQVT FSKRRMGLLK KANELAILCD AQVGVIVFSG SGKMYEYASP  60
PWRIANIFDR YLKAPSTRFD EMDVQQKIIH EMTRMKDESN RLKIIMRQYM GEDLGSLTLQ  120
DVSNLEQQIE FSLYKVRLRK QLLDQQLLEM RQREMHMSED QSSSYMFHMN PARDQPGQSA  180
DVMNPKLFPL WDVGDQIYGQ DAESSMTALK LSPQLQEYKL QPVQPNLQEG NLHGYVLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.24e-44MIKC_MADS family protein