PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG060480.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 206aa MW: 23181.2 Da PI: 9.3972 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.2 | 5e-22 | 42 | 125 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2AG060480.5 42 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPYPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 125 69********************8888.8999***********98877.....9***********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
QTADKPEEKA EEEPELPPEV VANAGGVPII GMVFESEEKA CKYYVSYAGN VGFSVRKGLW 60 DKTAKSGSRS RFYVCSREGF RAKNLPKRPY PETRTGCPAR FSIMLTPSGK YRVTEFVQDH 120 NHQLAGPIDI GMLKSQRLLS KVQSGNGNAI SIPPRYKNYL RTKPTKDMNA GDFRDLTDYF 180 RSMKSDNPSF YYAIQVDEND KAANVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-29 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG060480.5 |