PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG060480.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 196aa MW: 22568.6 Da PI: 9.642 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.3 | 4.4e-22 | 11 | 94 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2AG060480.3 11 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPYPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 94 69********************8888.8999***********98877.....9***********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MVFESEEKAC KYYVSYAGNV GFSVRKGLWD KTAKSGSRSR FYVCSREGFR AKNLPKRPYP 60 ETRTGCPARF SIMLTPSGKY RVTEFVQDHN HQLAGPIDIG MLKSQRLLSK VQSGNGNAIS 120 IPPRYKNYLR TKPTKDMNAG DFRDLTDYFR SMKSDNPSFY YAIQVDENDK AANVFWADAR 180 SIFDYHYFSD VICFDM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 5e-37 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG060480.3 |