PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG060230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 128aa MW: 13922.9 Da PI: 10.3163 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.6e-19 | 11 | 61 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ +g r++lg+++t eAa+a+++a+ ++g TRIDC2AG060230.1 11 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTSVEAARAYDRAAFGMRG 61 8********.**********96554..**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence |
PAPAPVEDLR KYRGVRQRPW GKYAAEIRDP KRRGSRVWLG TYDTSVEAAR AYDRAAFGMR 60 GAKAILNFPN EVGTRGAELW APPPSGPASQ TAGSHKGVWQ GDPVSPFLFN IAAECLCKMV 120 LQAQANGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47230.1 | 2e-34 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG060230.1 |