PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG060210.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 325aa    MW: 35409.8 Da    PI: 10.6093
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG060210.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-19137188256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       +y+GVr+++ +g+++AeIrdp+ +g   r++lg+++t  eAa+a+++a+ +++g+
  TRIDC2AG060210.2 137 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTSVEAARAYDRAAFRMRGA 188
                       8********.**********96554..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
GVRRRSRRLR SRPHPRAPPR RRRFPVLPPS AAEPQAYTQQ PMFFPQQQQQ QQENQQMQAY  60
MDLAHQYLNS CPAADVPETV FRAPEPVMIQ FGGEPSPVTA PSSTLSISVP AKGSFAWAGT  120
AAAAAPPAPA PVEDFRKYRG VRQRPWGKYA AEIRDPKRRG SRVWLGTYDT SVEAARAYDR  180
AAFRMRGAKA ILNFPNEVGT RGAELWAPPP PVPASQTAGA TNKRKRSHED DRDVEVTGVV  240
INKAPKNEAP SPSSAQVSWD TPSSMSRETA SSTVTSAATT PEGGLPPTPS SSGWEQYWEA  300
LLGGMPLLSP LSPHPALGFP QLTVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1323RRRSRRLRSRPHPRAPPRRRR
2512RSRRLRSR
31023RSRPHPRAPPRRRR
4223228KRKRSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-35ERF family protein