PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG060210.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 327aa    MW: 35075.1 Da    PI: 5.1946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG060210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.1e-19139190256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       +y+GVr+++ +g+++AeIrdp+ +g   r++lg+++t  eAa+a+++a+ +++g+
  TRIDC2AG060210.1 139 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTSVEAARAYDRAAFRMRGA 190
                       8********.**********96554..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MEFAGEVDDF ALDLIREHLL GGDGGVQATA TSAAEPQAYT QQPMFFPQQQ QQQQENQQMQ  60
AYMDLAHQYL NSCPAADVPE TVFRAPEPVM IQFGGEPSPV TAPSSTLSIS VPAKGSFAWA  120
GTAAAAAPPA PAPVEDFRKY RGVRQRPWGK YAAEIRDPKR RGSRVWLGTY DTSVEAARAY  180
DRAAFRMRGA KAILNFPNEV GTRGAELWAP PPPVPASQTA GATNKRKRSH EDDRDVEVTG  240
VVINKAPKNE APSPSSAQVS WDTPSSMSRE TASSTVTSAA TTPEGGLPPT PSSSGWEQYW  300
EALLGGMPLL SPLSPHPALG FPQLTVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1225230KRKRSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-35ERF family protein