PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG059990.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 131aa MW: 14494.3 Da PI: 8.9673 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.7 | 4.7e-19 | 65 | 116 | 2 | 53 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 rk+ +++k+q +Le+ F+++++++ ++++ LA++lgL rqV vWFqNrRa TRIDC2AG059990.2 65 RKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRSRQVEVWFQNRRA 116 788899*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 78.7 | 9.7e-26 | 65 | 116 | 1 | 52 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRA 52 +kk+rlsk+q+++LE+sF+e+ +L+p++K++la++Lgl+ rqv+vWFqnrRA TRIDC2AG059990.2 65 RKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRSRQVEVWFQNRRA 116 69*************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
LSLSSSLAPR THHVAMLLHA PERRLLEMPL LPAKRVCEVS ADEERSGQRG GSDDEDGGCG 60 MDGSRKKLRL SKDQSAVLED SFREHPTLNP RQKAALAQQL GLRSRQVEVW FQNRRASLCD 120 FVSASSNLGR S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 70 | SRKKLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 2e-31 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG059990.2 |