PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059990.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 227aa MW: 25684.1 Da PI: 8.603

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.1	1.7e-19	76	130	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Le+ F+++++++ ++++ LA++lgL rqV vWFqNrRa+ k TRIDC2AG059990.1 76 RKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRSRQVEVWFQNRRARTK 130 788899***********************************************98 PP
2	HD-ZIP_I/II	125.9	1.8e-40	76	165	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LE+sF+e+ +L+p++K++la++Lgl+ rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l TRIDC2AG059990.1 76 RKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRSRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVHELR-AL 165 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MMERAEDLGL SLSLSSSLAP RTHHVAMLLH APERRLLEMP LLPAKRVCEV SADEERSGQR 60 GGSDDEDGGC GMDGSRKKLR LSKDQSAVLE DSFREHPTLN PRQKAALAQQ LGLRSRQVEV 120 WFQNRRARTK LKQTEVDCEF LKRCCETLTE ENRRLQKEVH ELRALKLVSP HHYMHMSPPT 180 TLTMCPSCER VSNNNNNNNN NSTAADRRNG VEGAICHRPI AVRPQQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	75	81	SRKKLRL
2	125	133	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	2e-75	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059990.1