PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG059920.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 282aa    MW: 29721.9 Da    PI: 5.227
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG059920.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.4e-19103153155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  TRIDC2AG059920.2 103 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 153
                       57*****887.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
PCYRAMEADA SHAPTTSSSS VSSSTLSTSS SSSSLATSAL ELPKSPKPKH PKKRKRAASD  60
REQDAAANTN GVRGDESSCC STDEDFAAAS VKAAVPKSGF KHPSYRGVRR RSWGKWVSEI  120
REPRKKSRIW LGTFPTAEMA ARAHDVAALA IKGRSAHLNF PELAHELPRP DSTSPADIQA  180
AAAKAAATAA VQCEAEPEHE HEPETPSSSS GAVSETPEAA ACAEAAPADS GEVDNALFDL  240
PDLLLDLRDG LFWSPVWPAA LAAEEYDGGC CVGLSEPLLW AE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14655PKPKHPKKRK
24955KHPKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.11e-43ERF family protein