PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG059730.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 149aa MW: 15660.8 Da PI: 9.1355 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 67.8 | 2.2e-21 | 104 | 149 | 1 | 46 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTT CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqC 46 +CqvegC++ l+ akeyhrrhkvCe+hskap v+v+g eqrfCqqC TRIDC2AG059730.4 104 RCQVEGCHMALAGAKEYHRRHKVCEAHSKAPRVIVHGAEQRFCQQC 149 6********************************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MEGDGDARSR ATLAWDLGVQ WAPAASAAYP QHFLPPPGVA SQQQQHMQQE LTSLKLGKRP 60 CSLPGGQVAV AQVDGSGGGG GRAAVEGKRK EKAAGAAATA AMPRCQVEGC HMALAGAKEY 120 HRRHKVCEAH SKAPRVIVHG AEQRFCQQC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27370.3 | 2e-19 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG059730.4 |