PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG059730.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 180aa MW: 19617 Da PI: 12.4291 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 48.7 | 2e-15 | 131 | 162 | 45 | 77 |
TTSSEEETTT--SS--S-STTTT-------S-- CS SBP 45 qCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C fh++ efD++krsCrrrLa+hnerrrk++ TRIDC2AG059730.3 131 AC-SFHAMAEFDDAKRSCRRRLAGHNERRRKSN 162 34.5***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
LASSSSTCSR SSLASSWGSA RAPCPAARWL WLRSTGAEAA AGVPRWRARG RRRRPGRRQR 60 RPCRGARWKG ATWRWRGPRS TTGGTRCARR TPRRPGSSCT APSSASASNA AVRAESLSCA 120 SVDSLLCVYN ACSFHAMAEF DDAKRSCRRR LAGHNERRRK SNASDAMARG SAHAHGNPRH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 52 | 59 | RRRPGRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 6e-12 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG059730.3 |