PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059730.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 349aa MW: 36409 Da PI: 9.6828

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059730.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.9	8.9e-41	104	180	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++ l+ akeyhrrhkvCe+hskap v+v+g eqrfCqqCsrfh++ efD++krsCrrrLa+hnerrrk++ TRIDC2AG059730.2 104 RCQVEGCHMALAGAKEYHRRHKVCEAHSKAPRVIVHGAEQRFCQQCSRFHAMAEFDDAKRSCRRRLAGHNERRRKSN 180 6**************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MEGDGDARSR ATLAWDLGVQ WAPAASAAYP QHFLPPPGVA SQQQQHMQQE LTSLKLGKRP 60 CSLPGGQVAV AQVDGSGGGG GRAAVEGKRK EKAAGAAATA AMPRCQVEGC HMALAGAKEY 120 HRRHKVCEAH SKAPRVIVHG AEQRFCQQCS RFHAMAEFDD AKRSCRRRLA GHNERRRKSN 180 ASDAMARGSA HAHGVASLVH GFAPYVGLPT SPAGALSLLS SARAAPWLVP TTPGDAFSAR 240 SSSAALDELI AENRAALLAC HFFPQRSAAR PAAAEMAPAW HQAHQQAPPG HDQGAPLPAG 300 AGHVTLDLMQ APGTAGLPFR PMAQGRPAED GDAGRSSGVW TPLQGAHAV

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MEGDGDARSR ATLAWDLGVQ WAPAASAAYP QHFLPPPGVA SQQQQHMQQE LTSLKLGKRP  60
CSLPGGQVAV AQVDGSGGGG GRAAVEGKRK EKAAGAAATA AMPRCQVEGC HMALAGAKEY  120
HRRHKVCEAH SKAPRVIVHG AEQRFCQQCS RFHAMAEFDD AKRSCRRRLA GHNERRRKSN  180
ASDAMARGSA HAHGVASLVH GFAPYVGLPT SPAGALSLLS SARAAPWLVP TTPGDAFSAR  240
SSSAALDELI AENRAALLAC HFFPQRSAAR PAAAEMAPAW HQAHQQAPPG HDQGAPLPAG  300
AGHVTLDLMQ APGTAGLPFR PMAQGRPAED GDAGRSSGVW TPLQGAHAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	3e-36	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059730.2