PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG058460.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Nin-like | ||||||||
Protein Properties | Length: 349aa MW: 39711.5 Da PI: 9.1432 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 80.9 | 1.3e-25 | 202 | 251 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RWPhRkiksl TRIDC2AG058460.3 202 ASITLADIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRWPHRKIKSL 251 78**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MDAAAAAVTT LSALAVFAST LHQGAVRSVH GYRVVAMGGR CAWDRWVERE FAFSPTSCRE 60 VPLPAAAPRI LPVEWRGRPA YREGQVLGAW RCVLAFDSIA AVPLPPTPPP MLCPFRNPGL 120 VCVPSLYNDL YMVYQFQKFQ QAPELVKRDS DEKSTRLEAE DKTSDVEVKE ESGSDSDEDP 180 QSGEELPAHV ERRRRAKKQH IASITLADIA PYFHLPIREA SRALKIGVSI LKQKCRQYGI 240 PRWPHRKIKS LDSLISDLES AAVDHFVMDD TDGDVVQKET RRQREKEKER EKEKEKQEAI 300 QALAKRKRLL ESEKEIIQQK PALDLMAETK LFREDVFKRR YRAKRLPGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 8e-43 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG058460.3 |