PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG058430.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 334aa    MW: 37725.1 Da    PI: 8.7608
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG058430.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.87.7e-27200249352
            RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ++i+led+ +yF+lpi++A+++L+++l++LK++CRqyGI+RWPhRk+ksl
  TRIDC2AG058430.2 200 ASITLEDITQYFHLPIREASRTLKIGLSILKKKCRQYGIPRWPHRKLKSL 249
                       68**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
AAAAASTLSA LAVFVSTVDR GAVRSAHGYR VAGKGGGCGW ERWVEREFAF TPTSAREVPL  60
PADALRLLPA DWRGRPVYRE GQIAGPWRCI LAFDFVAAVA PPPVPPPVLC PFRNPRLMCV  120
PSLYNDLTKV FQFQKVEEKV PGLVQCDSDE KLTTSDAKDR VSVKQEAGSD TDEPPQFGEG  180
SGHLLAPAEK QRRAHREYIA SITLEDITQY FHLPIREASR TLKIGLSILK KKCRQYGIPR  240
WPHRKLKSLD SLIHDLEFVI DDETERDGVK QEDHMQDEKE NQDAIEALAK RKRMLETEKA  300
TIQQKPTLDL MAETKQFRQY VFKRKYRAKT LVSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.15e-48Nin-like family protein