PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG057630.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 229aa MW: 24277.3 Da PI: 10.1997

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG057630.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.4	5.9e-24	136	180	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++ep rCrRtDGKkWRCsr v++g+k+CErH+hrgr r rk++e+ TRIDC2AG057630.3 136 EPEPDRCRRTDGKKWRCSRGVVPGHKYCERHVHRGRGRARKPVEA 180 699***************************************985 PP
2	QLQ	55.8	1.4e-19	70	106	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 sa+T +Q q+L++Q+l+y+y+aan+PvP +L+++i+k TRIDC2AG057630.3 70 SALTFMQRQELEHQVLIYRYFAANAPVPVHLVLPIWK 106 799*********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
RTPEMTERRQ EHSPPSKIPR LSGADDDDGA GTVTMAAPSP LVLGLGLGVG GSSSDSGRGD 60 AEASAATRPS ALTFMQRQEL EHQVLIYRYF AANAPVPVHL VLPIWKSVAA SSSAPQRFPS 120 LAGLGSMCYD HRSSMEPEPD RCRRTDGKKW RCSRGVVPGH KYCERHVHRG RGRARKPVEA 180 AAATSAVPIR AMHAADAQGA TSAHAAPPQR LGFSSPAGVY LAHGTARAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	5e-34	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG057630.3