PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG056120.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 224aa MW: 25785.4 Da PI: 12.2491

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG056120.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.2	1.6e-19	19	72	4	56
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ft+eq++ Le++F+ + ++ +e++eLA++lgL+ rqV +WFqN+Ra+++ TRIDC2AG056120.3 19 KRRFTEEQTRSLESMFHAhHAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 72 458************9899******************************9 PP
2	HD-ZIP_I/II	120.6	8.3e-39	17	103	1	86
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86 e+krr+++eq ++LE++F++++ kLep++K+elareLglqprqva+WFqn+RAR+++kqlE+d++aL++ ydal+++ e+L++e+ + TRIDC2AG056120.3 17 ERKRRFTEEQTRSLESMFHAHHaKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDFTALRADYDALHSRVESLKHEKLA 103 69****************999**********************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
EEQLCFVGRG GGGRGAERKR RFTEEQTRSL ESMFHAHHAK LEPREKAELA RELGLQPRQV 60 AIWFQNKRAR WRSKQLEHDF TALRADYDAL HSRVESLKHE KLAVCAVAGA EREAEGEGRR 120 RRWRGDRHRQ QQQLQRRRPG AGRRQEERRR RRAPRELRAR RDGVRHAGGR LGVGGVRVRR 180 PPPLRRGGLP GVLLRHAGAV GAVAVAARRV ERGGLRPWSS IYML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	152	RRRPGAGRRQEERRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.2	1e-30	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG056120.3