PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG056120.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 224aa    MW: 25785.4 Da    PI: 12.2491
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG056120.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.21.6e-191972456
                      -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +++ft+eq++ Le++F+  + ++  +e++eLA++lgL+ rqV +WFqN+Ra+++
  TRIDC2AG056120.3 19 KRRFTEEQTRSLESMFHAhHAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 72
                      458**************9899********************************9 PP

2HD-ZIP_I/II120.68.3e-3917103186
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86 
                       e+krr+++eq ++LE++F++++ kLep++K+elareLglqprqva+WFqn+RAR+++kqlE+d++aL++ ydal+++ e+L++e+ +
  TRIDC2AG056120.3  17 ERKRRFTEEQTRSLESMFHAHHaKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDFTALRADYDALHSRVESLKHEKLA 103
                       69******************999************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
EEQLCFVGRG GGGRGAERKR RFTEEQTRSL ESMFHAHHAK LEPREKAELA RELGLQPRQV  60
AIWFQNKRAR WRSKQLEHDF TALRADYDAL HSRVESLKHE KLAVCAVAGA EREAEGEGRR  120
RRWRGDRHRQ QQQLQRRRPG AGRRQEERRR RRAPRELRAR RDGVRHAGGR LGVGGVRVRR  180
PPPLRRGGLP GVLLRHAGAV GAVAVAARRV ERGGLRPWSS IYML
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136152RRRPGAGRRQEERRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.21e-30HD-ZIP family protein