PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG056070.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 703aa MW: 76651.8 Da PI: 9.4635

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG056070.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	101	9.5e-32	96	180	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+++e+laLi++r+em++++r++ lk+plWeevs+k++e g++rs+k+Ckek+en++k+yk++keg+ +r++++s +++f++lea TRIDC2AG056070.5 96 RWPREETLALIRIRSEMDTTFRDATLKGPLWEEVSRKLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YRFFQELEA 180 8*******************************************************************866665..****985 PP
2	trihelix	109.8	1.7e-34	503	588	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r +m++r++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+qlea TRIDC2AG056070.5 503 RWPKTEVHALIQLRMDMDNRYQENGPKGPLWEEISAGMRRLGYSRNSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLEA 588 8******************************************************************97.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
AASSMQQHQH QGDASQYGAP PQPADMGPFS AQQAPAPVPL SVRPPPTQHQ QQQNPQPSYD 60 ELAGASGAGA SGFPDDDMLG DSGGHSGGGL GSGGNRWPRE ETLALIRIRS EMDTTFRDAT 120 LKGPLWEEVS RKLAELGYKR SAKKCKEKFE NVHKYYKRTK EGRAGRQDGK SYRFFQELEA 180 LHAATAAAQH HQQHQEQLPL VVSAAPPPQM HAFSAPQPMS AMPPPPGPMQ PAPISSAAPA 240 PAVEPPQPPP VSLQGLSFPC MSDSESDDDD DSEDDDMTAE TGGSPDGLGK RKRGGGGSKK 300 MMAFFEGLMK QVVQRQEEMQ QRFLETMEKR EAERTAREEA WRRQEVARLN REQEQLAQER 360 AAAASRDASI IAFLQRIGGQ AVHVPPVVIP MPTPMQVQTP PPPKKPRQHL PPPPPSQATQ 420 QPQPQPQPQP QPIPAAPLQQ QPPSQPPQHK ETTREEAGTP RSAPAPTSAG LSLALVPVAT 480 EQHVVEAAGL GGGESVGGPS SSRWPKTEVH ALIQLRMDMD NRYQENGPKG PLWEEISAGM 540 RRLGYSRNSK RCKEKWENIN KYFKKVKESN KRRPEDSKTC PYFHQLEAIY RKKHNGGGSS 600 GAAANNAVVP VPAVAEHQNL NRHEIEIEGK KINDTDKRNN GGVGAAQVPT SNGQTTPPTA 660 TFDLGVKKRI CACRKARRRC EGAERAAAPG VHDGRDRQRR HGR

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

AASSMQQHQH QGDASQYGAP PQPADMGPFS AQQAPAPVPL SVRPPPTQHQ QQQNPQPSYD  60
ELAGASGAGA SGFPDDDMLG DSGGHSGGGL GSGGNRWPRE ETLALIRIRS EMDTTFRDAT  120
LKGPLWEEVS RKLAELGYKR SAKKCKEKFE NVHKYYKRTK EGRAGRQDGK SYRFFQELEA  180
LHAATAAAQH HQQHQEQLPL VVSAAPPPQM HAFSAPQPMS AMPPPPGPMQ PAPISSAAPA  240
PAVEPPQPPP VSLQGLSFPC MSDSESDDDD DSEDDDMTAE TGGSPDGLGK RKRGGGGSKK  300
MMAFFEGLMK QVVQRQEEMQ QRFLETMEKR EAERTAREEA WRRQEVARLN REQEQLAQER  360
AAAASRDASI IAFLQRIGGQ AVHVPPVVIP MPTPMQVQTP PPPKKPRQHL PPPPPSQATQ  420
QPQPQPQPQP QPIPAAPLQQ QPPSQPPQHK ETTREEAGTP RSAPAPTSAG LSLALVPVAT  480
EQHVVEAAGL GGGESVGGPS SSRWPKTEVH ALIQLRMDMD NRYQENGPKG PLWEEISAGM  540
RRLGYSRNSK RCKEKWENIN KYFKKVKESN KRRPEDSKTC PYFHQLEAIY RKKHNGGGSS  600
GAAANNAVVP VPAVAEHQNL NRHEIEIEGK KINDTDKRNN GGVGAAQVPT SNGQTTPPTA  660
TFDLGVKKRI CACRKARRRC EGAERAAAPG VHDGRDRQRR HGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	147	KRSAKKCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-48	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG056070.5