PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG056070.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 747aa MW: 81310.3 Da PI: 6.4409

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG056070.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	100.9	1e-31	90	174	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+++e+laLi++r+em++++r++ lk+plWeevs+k++e g++rs+k+Ckek+en++k+yk++keg+ +r++++s +++f++lea TRIDC2AG056070.4 90 RWPREETLALIRIRSEMDTTFRDATLKGPLWEEVSRKLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YRFFQELEA 174 8*******************************************************************866665..****985 PP
2	trihelix	109.7	1.9e-34	497	582	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r +m++r++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+qlea TRIDC2AG056070.4 497 RWPKTEVHALIQLRMDMDNRYQENGPKGPLWEEISAGMRRLGYSRNSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLEA 582 8******************************************************************97.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 747 aa Download sequence
QHQHQGDASQ YGAPPQPADM GPFSAQQAPA PVPLSVRPPP TQHQQQQNPQ PSYDELAGAS 60 GAGASGFPDD DMLGDSGGHS GGGLGSGGNR WPREETLALI RIRSEMDTTF RDATLKGPLW 120 EEVSRKLAEL GYKRSAKKCK EKFENVHKYY KRTKEGRAGR QDGKSYRFFQ ELEALHAATA 180 AAQHHQQHQE QLPLVVSAAP PPQMHAFSAP QPMSAMPPPP GPMQPAPISS AAPAPAVEPP 240 QPPPVSLQGL SFPCMSDSES DDDDDSEDDD MTAETGGSPD GLGKRKRGGG GSKKMMAFFE 300 GLMKQVVQRQ EEMQQRFLET MEKREAERTA REEAWRRQEV ARLNREQEQL AQERAAAASR 360 DASIIAFLQR IGGQAVHVPP VVIPMPTPMQ VQTPPPPKKP RQHLPPPPPS QATQQPQPQP 420 QPQPQPIPAA PLQQQPPSQP PQHKETTREE AGTPRSAPAP TSAGLSLALV PVATEQHVVE 480 AAGLGGGESV GGPSSSRWPK TEVHALIQLR MDMDNRYQEN GPKGPLWEEI SAGMRRLGYS 540 RNSKRCKEKW ENINKYFKKV KESNKRRPED SKTCPYFHQL EAIYRKKHNG GGSSGAAANN 600 AVVPVPAVAE HQNLNRHEIE IEGKKINDTD KRNNGGVGAA QVPTSNGQTT PPTATFDLGV 660 KKPEDAVREL NEQPHREFTT DETDSDDMGD DYTDDGEDGE DDGKMQYRIQ FQRPNPVGTN 720 NAPPSPTTAA TAAPTSTPAS SFLAMVQ

Sequence ? help Back to Top

Protein Sequence Length: 747 aa Download sequence

QHQHQGDASQ YGAPPQPADM GPFSAQQAPA PVPLSVRPPP TQHQQQQNPQ PSYDELAGAS  60
GAGASGFPDD DMLGDSGGHS GGGLGSGGNR WPREETLALI RIRSEMDTTF RDATLKGPLW  120
EEVSRKLAEL GYKRSAKKCK EKFENVHKYY KRTKEGRAGR QDGKSYRFFQ ELEALHAATA  180
AAQHHQQHQE QLPLVVSAAP PPQMHAFSAP QPMSAMPPPP GPMQPAPISS AAPAPAVEPP  240
QPPPVSLQGL SFPCMSDSES DDDDDSEDDD MTAETGGSPD GLGKRKRGGG GSKKMMAFFE  300
GLMKQVVQRQ EEMQQRFLET MEKREAERTA REEAWRRQEV ARLNREQEQL AQERAAAASR  360
DASIIAFLQR IGGQAVHVPP VVIPMPTPMQ VQTPPPPKKP RQHLPPPPPS QATQQPQPQP  420
QPQPQPIPAA PLQQQPPSQP PQHKETTREE AGTPRSAPAP TSAGLSLALV PVATEQHVVE  480
AAGLGGGESV GGPSSSRWPK TEVHALIQLR MDMDNRYQEN GPKGPLWEEI SAGMRRLGYS  540
RNSKRCKEKW ENINKYFKKV KESNKRRPED SKTCPYFHQL EAIYRKKHNG GGSSGAAANN  600
AVVPVPAVAE HQNLNRHEIE IEGKKINDTD KRNNGGVGAA QVPTSNGQTT PPTATFDLGV  660
KKPEDAVREL NEQPHREFTT DETDSDDMGD DYTDDGEDGE DDGKMQYRIQ FQRPNPVGTN  720
NAPPSPTTAA TAAPTSTPAS SFLAMVQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	141	KRSAKKCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	3e-48	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG056070.4