PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG056070.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 662aa MW: 72452.3 Da PI: 7.7392

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG056070.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.4	1.8e-13	45	89	41	87
trihelix 41 rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 g++rs+k+Ckek+en++k+yk++keg+ +r++++s +++f++lea TRIDC2AG056070.3 45 LGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YRFFQELEA 89 69**************************866665..****985 PP
2	trihelix	109.9	1.6e-34	412	497	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r +m++r++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+qlea TRIDC2AG056070.3 412 RWPKTEVHALIQLRMDMDNRYQENGPKGPLWEEISAGMRRLGYSRNSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLEA 497 8******************************************************************97.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
IPILPICFLP RPSLSLSLSS ARRGGKREDT HAKLLLLLLP PPPPLGYKRS AKKCKEKFEN 60 VHKYYKRTKE GRAGRQDGKS YRFFQELEAL HAATAAAQHH QQHQEQLPLV VSAAPPPQMH 120 AFSAPQPMSA MPPPPGPMQP APISSAAPAP AVEPPQPPPV SLQGLSFPCM SDSESDDDDD 180 SEDDDMTAET GGSPDGLGKR KRGGGGSKKM MAFFEGLMKQ VVQRQEEMQQ RFLETMEKRE 240 AERTAREEAW RRQEVARLNR EQEQLAQERA AAASRDASII AFLQRIGGQA VHVPPVVIPM 300 PTPMQVQTPP PPKKPRQHLP PPPPSQATQQ PQPQPQPQPQ PIPAAPLQQQ PPSQPPQHKE 360 TTREEAGTPR SAPAPTSAGL SLALVPVATE QHVVEAAGLG GGESVGGPSS SRWPKTEVHA 420 LIQLRMDMDN RYQENGPKGP LWEEISAGMR RLGYSRNSKR CKEKWENINK YFKKVKESNK 480 RRPEDSKTCP YFHQLEAIYR KKHNGGGSSG AAANNAVVPV PAVAEHQNLN RHEIEIEGKK 540 INDTDKRNNG GVGAAQVPTS NGQTTPPTAT FDLGVKKPED AVRELNEQPH REFTTDETDS 600 DDMGDDYTDD GEDGEDDGKM QYRIQFQRPN PVGTNNAPPS PTTAATAAPT STPASSFLAM 660 VQ

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

IPILPICFLP RPSLSLSLSS ARRGGKREDT HAKLLLLLLP PPPPLGYKRS AKKCKEKFEN  60
VHKYYKRTKE GRAGRQDGKS YRFFQELEAL HAATAAAQHH QQHQEQLPLV VSAAPPPQMH  120
AFSAPQPMSA MPPPPGPMQP APISSAAPAP AVEPPQPPPV SLQGLSFPCM SDSESDDDDD  180
SEDDDMTAET GGSPDGLGKR KRGGGGSKKM MAFFEGLMKQ VVQRQEEMQQ RFLETMEKRE  240
AERTAREEAW RRQEVARLNR EQEQLAQERA AAASRDASII AFLQRIGGQA VHVPPVVIPM  300
PTPMQVQTPP PPKKPRQHLP PPPPSQATQQ PQPQPQPQPQ PIPAAPLQQQ PPSQPPQHKE  360
TTREEAGTPR SAPAPTSAGL SLALVPVATE QHVVEAAGLG GGESVGGPSS SRWPKTEVHA  420
LIQLRMDMDN RYQENGPKGP LWEEISAGMR RLGYSRNSKR CKEKWENINK YFKKVKESNK  480
RRPEDSKTCP YFHQLEAIYR KKHNGGGSSG AAANNAVVPV PAVAEHQNLN RHEIEIEGKK  540
INDTDKRNNG GVGAAQVPTS NGQTTPPTAT FDLGVKKPED AVRELNEQPH REFTTDETDS  600
DDMGDDYTDD GEDGEDDGKM QYRIQFQRPN PVGTNNAPPS PTTAATAAPT STPASSFLAM  660
VQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	48	56	KRSAKKCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-48	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG056070.3