PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG056070.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 427aa MW: 46836.6 Da PI: 9.3068

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG056070.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	110.8	8.1e-35	259	344	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r +m++r++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+qlea TRIDC2AG056070.2 259 RWPKTEVHALIQLRMDMDNRYQENGPKGPLWEEISAGMRRLGYSRNSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLEA 344 8******************************************************************97.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
PPQPPPVSLQ GLSFPCMSDS ESDDDDDSED DDMTAETGGS PDGLGKRKRG GGGSKKMMAF 60 FEGLMKQVVQ RQEEMQQRFL ETMEKREAER TAREEAWRRQ EVARLNREQE QLAQERAAAA 120 SRDASIIAFL QRIGGQAVHV PPVVIPMPTP MQVQTPPPPK KPRQHLPPPP PSQATQQPQP 180 QPQPQPQPIP AAPLQQQPPS QPPQHKETTR EEAGTPRSAP APTSAGLSLA LVPVATEQHV 240 VEAAGLGGGE SVGGPSSSRW PKTEVHALIQ LRMDMDNRYQ ENGPKGPLWE EISAGMRRLG 300 YSRNSKRCKE KWENINKYFK KVKESNKRRP EDSKTCPYFH QLEAIYRKKH NGGGSSGAAA 360 NNAVVPVPAV AEHQNLNRHE IEIEGKKIND TDKRNNGGVG AAQVPTSNGQ TTPPTATFDL 420 GVKKKTL

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

PPQPPPVSLQ GLSFPCMSDS ESDDDDDSED DDMTAETGGS PDGLGKRKRG GGGSKKMMAF  60
FEGLMKQVVQ RQEEMQQRFL ETMEKREAER TAREEAWRRQ EVARLNREQE QLAQERAAAA  120
SRDASIIAFL QRIGGQAVHV PPVVIPMPTP MQVQTPPPPK KPRQHLPPPP PSQATQQPQP  180
QPQPQPQPIP AAPLQQQPPS QPPQHKETTR EEAGTPRSAP APTSAGLSLA LVPVATEQHV  240
VEAAGLGGGE SVGGPSSSRW PKTEVHALIQ LRMDMDNRYQ ENGPKGPLWE EISAGMRRLG  300
YSRNSKRCKE KWENINKYFK KVKESNKRRP EDSKTCPYFH QLEAIYRKKH NGGGSSGAAA  360
NNAVVPVPAV AEHQNLNRHE IEIEGKKIND TDKRNNGGVG AAQVPTSNGQ TTPPTATFDL  420
GVKKKTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-50	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG056070.2