PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG055910.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 409aa    MW: 44072.3 Da    PI: 6.8348
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG055910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.22.7e-19327361135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  TRIDC2AG055910.1 327 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRL 361
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
PLPFASNASP AAAAATTLRP SAMPSYAHHH SSLDERMDAL KGSSRQEETP DEAAAAAEAP  60
AAWGFAERDG FSVEDLLDLE EFCEPDKDSA DEPEEAPAAD VKEEKLNDGP NQPVVSYELA  120
PPAPPAPEIV DLPAHDVEEE LEWVSRIMDD SLSELPPQPA PPASMMASLA PRPPQHRLPQ  180
RHPLPQRHPQ DGAYRALPSM SDPMRTPTIC ALSTEALVPV KAKRSKRSRA SGWSLSGPAP  240
DSTSSSSTTT TSSCSSSASF SPYFLLDTPH FGASELMEEY NILPPPAKKS KHGKSSKQKV  300
KKRGRKPKNL PAHPSSATEA TQSDRRCSHC GVQKTPQWRA GPEGAKTLCN ACGVRYKSGR  360
LLPEYRPACS PTYVSSVHSN SHRKVLEMRR KKEDGPLTVT ATAPAVASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-39GATA family protein