PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG055820.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 215aa    MW: 23871 Da    PI: 10.3307
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG055820.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.61.1e-1859112356
                       --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       k++++t+eq e Le  F+++r++ + ++  LA++lgL+ +qV vWFqNrRa++k
  TRIDC2AG055820.2  59 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHK 112
                       45689***********************************************99 PP

2HD-ZIP_I/II114.28.2e-3759150293
       HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                       kkrrl++eq+++LE sF+ee+kLe+ rKv la eLgl+p+qvavWFqnrRAR+k+k lE+++++Lk+a+da   ++++Le+ev +L+e+l++
  TRIDC2AG055820.2  59 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHKSKTLEQEFARLKHAHDAAILHKCHLENEVLRLKEKLRA 150
                       9**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
WTTSSSLVPP TWTRLSSRPM VRTAQRESKP KARRRRRRAA RCGGGDGNGW EMDGGGDPKK  60
RRLTDEQAEM LELSFREERK LETGRKVYLA AELGLDPKQV AVWFQNRRAR HKSKTLEQEF  120
ARLKHAHDAA ILHKCHLENE VLRLKEKLRA TAEEVQRLRS AAGIHANGGD SAGAVSVCGG  180
NPGSSFSTGT CQQHPGFSGA DVLGRDDDLM MCVPE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13338RRRRRR
23341RRRRRRAAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36740.18e-39HD-ZIP family protein