PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG055820.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 215aa MW: 23871 Da PI: 10.3307

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG055820.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.6	1.1e-18	59	112	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq e Le F+++r++ + ++ LA++lgL+ +qV vWFqNrRa++k TRIDC2AG055820.2 59 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHK 112 45689***********************************************99 PP
2	HD-ZIP_I/II	114.2	8.2e-37	59	150	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl++eq+++LE sF+ee+kLe+ rKv la eLgl+p+qvavWFqnrRAR+k+k lE+++++Lk+a+da ++++Le+ev +L+e+l++ TRIDC2AG055820.2 59 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHKSKTLEQEFARLKHAHDAAILHKCHLENEVLRLKEKLRA 150 9**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
WTTSSSLVPP TWTRLSSRPM VRTAQRESKP KARRRRRRAA RCGGGDGNGW EMDGGGDPKK 60 RRLTDEQAEM LELSFREERK LETGRKVYLA AELGLDPKQV AVWFQNRRAR HKSKTLEQEF 120 ARLKHAHDAA ILHKCHLENE VLRLKEKLRA TAEEVQRLRS AAGIHANGGD SAGAVSVCGG 180 NPGSSFSTGT CQQHPGFSGA DVLGRDDDLM MCVPE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	38	RRRRRR
2	33	41	RRRRRRAAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	8e-39	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG055820.2