PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG055820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 218aa MW: 24364.4 Da PI: 9.4732 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.5 | 1.1e-18 | 62 | 115 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq e Le F+++r++ + ++ LA++lgL+ +qV vWFqNrRa++k TRIDC2AG055820.1 62 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHK 115 45689***********************************************99 PP | |||||||
2 | HD-ZIP_I/II | 114.1 | 8.4e-37 | 62 | 153 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl++eq+++LE sF+ee+kLe+ rKv la eLgl+p+qvavWFqnrRAR+k+k lE+++++Lk+a+da ++++Le+ev +L+e+l++ TRIDC2AG055820.1 62 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHKSKTLEQEFARLKHAHDAAILHKCHLENEVLRLKEKLRA 153 9**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
REARDLSFPS TPCRQWSRCE HWPHGTAQRE SKPKARRRRR RAARCGGGDG NGWEMDGGGD 60 PKKRRLTDEQ AEMLELSFRE ERKLETGRKV YLAAELGLDP KQVAVWFQNR RARHKSKTLE 120 QEFARLKHAH DAAILHKCHL ENEVLRLKEK LRATAEEVQR LRSAAGIHAN GGDSAGAVSV 180 CGGNPGSSFS TGTCQQHPGF SGADVLGRDD DLMMCVPE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 36 | 41 | RRRRRR |
2 | 36 | 44 | RRRRRRAAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 2e-38 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG055820.1 |