PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG055590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 262aa MW: 28473.2 Da PI: 8.0334 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 202.7 | 1.5e-62 | 28 | 220 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas.....qllaaeshldeslkee...................... 70 eq+Cyv+CnfC+tilav vP +slfk+v+vrCGhC++llsvnl++ ++l+ + + TRIDC2AG055590.1 28 AEQEQLCYVHCNFCDTILAVGVPCSSLFKTVAVRCGHCANLLSVNLRNLLlpataNQLPFSP--------Sllsptspasphglldemssfqa 112 6789*****************************************99876333333333333........23333555688898888888876 PP YABBY 71 ...lleelkveeenlksnvekeesastsvssekl...senedeevprvpp...virPPekrqrvPsaynrfikeeiqrikasnPdishreafs 154 l +++ + + + + +++++a ++ +++++ ++ ++e+p+ + + PekrqrvPsaynrfik+eiqrika+nPdi+hreafs TRIDC2AG055590.1 113 pssL-LTDQASPNVSSITSSSNSCAINTPAMSMMpppEKPAQRETPQRKSaasGTKHPEKRQRVPSAYNRFIKDEIQRIKANNPDITHREAFS 204 6632.233333333333444445555555566668885666666665544222689************************************* PP YABBY 155 aaaknWahfPkihfgl 170 aaaknWahfP+ihfgl TRIDC2AG055590.1 205 AAAKNWAHFPHIHFGL 220 **************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MMSSPAESET SFFPDHLAEQ QQQQPPFAEQ EQLCYVHCNF CDTILAVGVP CSSLFKTVAV 60 RCGHCANLLS VNLRNLLLPA TANQLPFSPS LLSPTSPASP HGLLDEMSSF QAPSSLLTDQ 120 ASPNVSSITS SSNSCAINTP AMSMMPPPEK PAQRETPQRK SAASGTKHPE KRQRVPSAYN 180 RFIKDEIQRI KANNPDITHR EAFSAAAKNW AHFPHIHFGL MPDQGLMRKT SIQSQLDGAG 240 DCMLFKDKSL RSGGGRSSHS GI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 3e-48 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG055590.1 |