PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2AG053630.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 195aa MW: 22010 Da PI: 9.9336 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.9 | 5.6e-09 | 15 | 47 | 1 | 33 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgk 33 +g W++eEd++l d++ ++G +W+t++ + gk TRIDC2AG053630.6 15 KGLWSPEEDQKLRDYIVRYGHSCWSTVPVKAGK 47 678*************************99993 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 195 aa Download sequence |
MGCKSCQKPK AQHRKGLWSP EEDQKLRDYI VRYGHSCWST VPVKAGKNSL PAKRGRHFAR 60 DSPENFEGES GRFSSCLLAF MPKFRISPDF LPRLCKCTSA RGKGEDGELI SLELRLPWQV 120 GWGLNFAVNC RASEKRQELQ AAMDQLPEAG VEARHVLPGG GGDRHEPPRH TRQQVSIPST 180 HHNSHLFHPT FFGLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25560.1 | 2e-15 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2AG053630.6 |