PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG053470.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 400aa    MW: 47065.1 Da    PI: 9.2251
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG053470.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.87.3e-088465391
              FAR1 53 rtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
                      +++ + r++C a +++ ++kd+ w++++ +++HnH+l+p
  TRIDC2AG053470.6  8 ENTRSCRCECPALIRLLRTKDNGWYIAEHREQHNHSLSP 46
                      678899******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MQGKPGVENT RSCRCECPAL IRLLRTKDNG WYIAEHREQH NHSLSPTYGQ TIHWPSHKHI  60
DAYSRDLVEQ LRQNNVNLAK VHSIIGSFFG SMEKVPFTKR ALKNLCGKIN REQSEDDVRK  120
TMEVFAELGS RDPHFTYRVQ ADEDGRIATL MWANGSSRLQ YTFFGDVVTF DTTYRTNLYN  180
MPFGLFVGVN NHFQSIILAG VLVRDEKVET FEWVFIEFIR MMGETAPRTI LTDQCRAMEV  240
AIKNVMPQTA HRWCKWHVLK KAKESLGSLY SKKSEFRAEF HKVVNHMLTI DEFEEAWKIL  300
VEKYSLKTHD YMRQLYDIRH KWVKPYFKGV FCAKMSSTQR SESANHMLKN YVPLGCPMHM  360
FVKKYMRLQF DREAEENYEE KRTQIGRPLY RANLAIEACW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-60FAR1 family protein