PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG052050.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 245aa MW: 26068.1 Da PI: 6.954

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG052050.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	178.9	4.7e-56	55	150	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 +eqdrflPianvsrimk+ lPanakisk+aketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfe yv+plk+yl++yre+e TRIDC2AG052050.1 55 KEQDRFLPIANVSRIMKRSLPANAKISKEAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEVYVAPLKAYLNRYREVE 147 89******************************************************************************************* PP NF-YB 95 gek 97 gek TRIDC2AG052050.1 148 GEK 150 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
SHSHLSIFKW RSPRSIPPQL ILSLAYCRYG QQQSHLLSPV GSPSSDNGGG DSPAKEQDRF 60 LPIANVSRIM KRSLPANAKI SKEAKETVQE CVSEFISFVT GEASDKCQRE KRKTINGDDL 120 LWAMTTLGFE VYVAPLKAYL NRYREVEGEK AAVVGGSRLG DDDAHSSLSA AGDALAPQYT 180 HGAGDRGVQD GDLGGHDAHV GLMMGVNMGF NPGTGTTFYA APGAAHGRRA YGGGEGARGI 240 DFEAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	2e-62	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG052050.1