PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG051980.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 650aa MW: 68801.3 Da PI: 6.4361

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG051980.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.1	4.5e-13	263	322	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ k++ +g ++ +++Aa+a++ a++k++g TRIDC2AG051980.3 263 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgKQVCVGGYDKEDKAARAYDLAALKYWG 322 57*****************666664478446******99***********98 PP
2	AP2	51.5	2.5e-16	365	416	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC2AG051980.3 365 SKYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFTTEEEAAEAYDIAAIKFRG 416 89**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
NWLGFSLSGQ GSHPQPHQNG SPAAAAIDSD FYGLQAQTAP DAHLGMSGLR ADANYGVMDA 60 FNGGTQETQD WAMRGLDYHG GSSELSMLVG SSGGRMTVDD GEAPKLEDFL GGNSFSDVQD 120 HAGSYLFSSG SAMGSGAASG SHGVDGRGGS TIELSMIKTW LRNDNNEAQH DQEMSADASA 180 TSYACSGAPG STSNGVGVAS SRGQGLALSM SMGSNSHPQM PVVPAAVGTE STSSENKRVD 240 SPSAGTADAV QRKSIDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QTRKGKQVCV 300 GGYDKEDKAA RAYDLAALKY WGTTTTTNIP ISTYEKEIEE MKHMTRQEYI AYLRRNSSGF 360 SRGASKYRGV TRHHQQGRWQ ARIGRVAGNK DLYLGTFTTE EEAAEAYDIA AIKFRGLNAV 420 TNFEMSRYDV KSILEGSTLP VGGAARRLKE AAELAEAGVW RAEDGSIVSH LQADAMAGCH 480 HGWPTSIAFG SHQQQQSAAQ LALHYPYGVG GQARGWCKPE QDAVIAAGHG GQNMQELHLG 540 SGGSTHNFFQ PASRTAVYGN GGGGAWYQGL GGNAYMMPVG TVVDADQGHS GSTATTEEGR 600 LVGYGGEAGV DPYAAMRRAY ELSQGSSSVS VAKVADGYSN NWSSPFNGMG

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

NWLGFSLSGQ GSHPQPHQNG SPAAAAIDSD FYGLQAQTAP DAHLGMSGLR ADANYGVMDA  60
FNGGTQETQD WAMRGLDYHG GSSELSMLVG SSGGRMTVDD GEAPKLEDFL GGNSFSDVQD  120
HAGSYLFSSG SAMGSGAASG SHGVDGRGGS TIELSMIKTW LRNDNNEAQH DQEMSADASA  180
TSYACSGAPG STSNGVGVAS SRGQGLALSM SMGSNSHPQM PVVPAAVGTE STSSENKRVD  240
SPSAGTADAV QRKSIDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QTRKGKQVCV  300
GGYDKEDKAA RAYDLAALKY WGTTTTTNIP ISTYEKEIEE MKHMTRQEYI AYLRRNSSGF  360
SRGASKYRGV TRHHQQGRWQ ARIGRVAGNK DLYLGTFTTE EEAAEAYDIA AIKFRGLNAV  420
TNFEMSRYDV KSILEGSTLP VGGAARRLKE AAELAEAGVW RAEDGSIVSH LQADAMAGCH  480
HGWPTSIAFG SHQQQQSAAQ LALHYPYGVG GQARGWCKPE QDAVIAAGHG GQNMQELHLG  540
SGGSTHNFFQ PASRTAVYGN GGGGAWYQGL GGNAYMMPVG TVVDADQGHS GSTATTEEGR  600
LVGYGGEAGV DPYAAMRRAY ELSQGSSSVS VAKVADGYSN NWSSPFNGMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-112	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG051980.3