PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG051980.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 652aa MW: 68974.4 Da PI: 6.4368

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG051980.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.1	6.6e-11	268	324	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g TRIDC2AG051980.1 268 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGKQ-GGYDKEDKAARAYDLAALKYWG 324 57*****************5544.2354448877.6699999***********98 PP
2	AP2	51.5	2.5e-16	367	418	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC2AG051980.1 367 SKYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFTTEEEAAEAYDIAAIKFRG 418 89**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MASANNWLGF SLSGQGSHPQ PHQNGSPAAA AIDSDFYGLQ AQTAPDAHLG MSGLRADANY 60 GVMDAFNGGT QETQDWAMRG LDYHGGSSEL SMLVGSSGGR MTVDDGEAPK LEDFLGGNSF 120 SDVQDHAGSY LFSSGSAMGS GAASGSHGVD GRGGSTIELS MIKTWLRNDN NEAQHDQEMS 180 ADASATSYAC SGAPGSTSNG VGVASSRGQG LALSMSMGSN SHPQMPVVPA AVGTESTSSE 240 NKRVDSPSAG TADAVQRKSI DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQTRKG 300 KQGGYDKEDK AARAYDLAAL KYWGTTTTTN IPISTYEKEI EEMKHMTRQE YIAYLRRNSS 360 GFSRGASKYR GVTRHHQQGR WQARIGRVAG NKDLYLGTFT TEEEAAEAYD IAAIKFRGLN 420 AVTNFEMSRY DVKSILEGST LPVGGAARRL KEAAELAEAG VWRAEDGSIV SHLQADAMAG 480 CHHGWPTSIA FGSHQQQQSA AQLALHYPYG VGGQARGWCK PEQDAVIAAG HGGQNMQELH 540 LGSGGSTHNF FQPASRTAVY GNGGGGAWYQ GLGGNAYMMP VGTVVDADQG HSGSTATTEE 600 GRLVGYGGEA GVDPYAAMRR AYELSQGSSS VSVAKVADGY SNNWSSPFNG MG

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MASANNWLGF SLSGQGSHPQ PHQNGSPAAA AIDSDFYGLQ AQTAPDAHLG MSGLRADANY  60
GVMDAFNGGT QETQDWAMRG LDYHGGSSEL SMLVGSSGGR MTVDDGEAPK LEDFLGGNSF  120
SDVQDHAGSY LFSSGSAMGS GAASGSHGVD GRGGSTIELS MIKTWLRNDN NEAQHDQEMS  180
ADASATSYAC SGAPGSTSNG VGVASSRGQG LALSMSMGSN SHPQMPVVPA AVGTESTSSE  240
NKRVDSPSAG TADAVQRKSI DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQTRKG  300
KQGGYDKEDK AARAYDLAAL KYWGTTTTTN IPISTYEKEI EEMKHMTRQE YIAYLRRNSS  360
GFSRGASKYR GVTRHHQQGR WQARIGRVAG NKDLYLGTFT TEEEAAEAYD IAAIKFRGLN  420
AVTNFEMSRY DVKSILEGST LPVGGAARRL KEAAELAEAG VWRAEDGSIV SHLQADAMAG  480
CHHGWPTSIA FGSHQQQQSA AQLALHYPYG VGGQARGWCK PEQDAVIAAG HGGQNMQELH  540
LGSGGSTHNF FQPASRTAVY GNGGGGAWYQ GLGGNAYMMP VGTVVDADQG HSGSTATTEE  600
GRLVGYGGEA GVDPYAAMRR AYELSQGSSS VSVAKVADGY SNNWSSPFNG MG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-109	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG051980.1