PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG051230.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CO-like

Protein Properties

Length: 318aa MW: 34008 Da PI: 6.5045

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG051230.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.6	1e-07	22	58	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 r C+ + + ++lfC+ + +lC+ C H g H TRIDC2AG051230.3 22 RACDSCATEAARLFCRADAAFLCAGCDARAH-GagsrH 58 67*************************9999.435667 PP
2	zf-B_box	25.2	3.4e-08	61	106	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 + C+ +e+ ++ C+ + lC++C +H H++vp+ TRIDC2AG051230.3 61 VWLCEVCEHAPAAVTCKADAAVLCASCDADIHAAnplarrHERVPV 106 679*****************************66888889999986 PP
3	CCT	70.1	5.6e-24	243	285	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+l+RY+eKrk+R+FeK+irY+sRKa+Ae+RpRvKGrF+k+ TRIDC2AG051230.3 243 REARLMRYREKRKSRRFEKTIRYASRKAYAETRPRVKGRFAKR 285 9****************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
VRAMEGEEKP VVGGAYWGVG ARACDSCATE AARLFCRADA AFLCAGCDAR AHGAGSRHAR 60 VWLCEVCEHA PAAVTCKADA AVLCASCDAD IHAANPLARR HERVPVAPFF GTAADAHKPF 120 VSSGAQAAAE DDGSNDAEAA SWLLPEPDHK DGATAEVFFA DSDHYLDLDF ARSMDDIKAI 180 SVQLNGQPEI DLNGGNKGFH SDHSMNHSVR IIPVLVHAQV SSSEAAVVPD AAAAPVVSRG 240 REREARLMRY REKRKSRRFE KTIRYASRKA YAETRPRVKG RFAKRTGTAD ADGLEEHEEM 300 YSSAAAAVAA LMAPGPDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24790.1	1e-64	CO-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG051230.3