PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG051020.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 608aa MW: 66486.5 Da PI: 6.8426

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG051020.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.2	3.4e-28	232	283	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i +++l+kyFs+++kdAAk+Lgvc+T+LKriCR +GI+RWP+Rki+++ TRIDC2AG051020.6 232 AEKNIGMDVLRKYFSGSLKDAAKSLGVCPTTLKRICRTHGISRWPSRKINKV 283 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MLPLALTWVP SSNGSDGGYV GHDSVLDSQS GKAILRIHES ACYVNDAKMQ GFFHACTETH 60 LEKGQGIAGR ALKSNLPFFS PNIREYGIKD YPLAHHARKF GLHAAVAIRL RSTYTGDDDY 120 ILEFFLPINC TGSEEQQMLL NNLSSTMQRI CKSLRTVSEA EVDKVDACTA VMYKATSGSC 180 LPTGQSWSSS HGDQPATEEA FQDLSLIDKQ GDMSEQAQSS SMRLAEKKRS TAEKNIGMDV 240 LRKYFSGSLK DAAKSLGVCP TTLKRICRTH GISRWPSRKI NKVNRSLKKI QTVINSVHGV 300 DSSLQYDPAT GSLVPAVSLP EKTSFPSCDA VSSPSVGKTV DEKSGPKSEQ GYSSPEGWER 360 DSCQLQRSDA QKGEGDEFHM QTTKYSGSGE HGSYGPNITH HISSEGTQGP LYPTGAVSAL 420 HDKETGCIEP LPCVLPSIKT TRDQIVGRNS PPMQQADIDM FDDREGREHT HPSTSGMTDS 480 SSGSASSHPT FKKNPARPLK DKSSPALTVK ATYNGDTVRF KFLPSMGWYH LLEEIAKRFK 540 LLTGVFQLKY KDDEDEWVIM ANDSDLQECV DVMDSMGTRN VKLQVRDLPC LISSSGSSSC 600 LQLEGHNS

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MLPLALTWVP SSNGSDGGYV GHDSVLDSQS GKAILRIHES ACYVNDAKMQ GFFHACTETH  60
LEKGQGIAGR ALKSNLPFFS PNIREYGIKD YPLAHHARKF GLHAAVAIRL RSTYTGDDDY  120
ILEFFLPINC TGSEEQQMLL NNLSSTMQRI CKSLRTVSEA EVDKVDACTA VMYKATSGSC  180
LPTGQSWSSS HGDQPATEEA FQDLSLIDKQ GDMSEQAQSS SMRLAEKKRS TAEKNIGMDV  240
LRKYFSGSLK DAAKSLGVCP TTLKRICRTH GISRWPSRKI NKVNRSLKKI QTVINSVHGV  300
DSSLQYDPAT GSLVPAVSLP EKTSFPSCDA VSSPSVGKTV DEKSGPKSEQ GYSSPEGWER  360
DSCQLQRSDA QKGEGDEFHM QTTKYSGSGE HGSYGPNITH HISSEGTQGP LYPTGAVSAL  420
HDKETGCIEP LPCVLPSIKT TRDQIVGRNS PPMQQADIDM FDDREGREHT HPSTSGMTDS  480
SSGSASSHPT FKKNPARPLK DKSSPALTVK ATYNGDTVRF KFLPSMGWYH LLEEIAKRFK  540
LLTGVFQLKY KDDEDEWVIM ANDSDLQECV DVMDSMGTRN VKLQVRDLPC LISSSGSSSC  600
LQLEGHNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	3e-99	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG051020.6