PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG051020.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Nin-like | ||||||||
Protein Properties | Length: 608aa MW: 66486.5 Da PI: 6.8426 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 89.2 | 3.4e-28 | 232 | 283 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i +++l+kyFs+++kdAAk+Lgvc+T+LKriCR +GI+RWP+Rki+++ TRIDC2AG051020.10 232 AEKNIGMDVLRKYFSGSLKDAAKSLGVCPTTLKRICRTHGISRWPSRKINKV 283 589***********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 608 aa Download sequence |
MLPLALTWVP SSNGSDGGYV GHDSVLDSQS GKAILRIHES ACYVNDAKMQ GFFHACTETH 60 LEKGQGIAGR ALKSNLPFFS PNIREYGIKD YPLAHHARKF GLHAAVAIRL RSTYTGDDDY 120 ILEFFLPINC TGSEEQQMLL NNLSSTMQRI CKSLRTVSEA EVDKVDACTA VMYKATSGSC 180 LPTGQSWSSS HGDQPATEEA FQDLSLIDKQ GDMSEQAQSS SMRLAEKKRS TAEKNIGMDV 240 LRKYFSGSLK DAAKSLGVCP TTLKRICRTH GISRWPSRKI NKVNRSLKKI QTVINSVHGV 300 DSSLQYDPAT GSLVPAVSLP EKTSFPSCDA VSSPSVGKTV DEKSGPKSEQ GYSSPEGWER 360 DSCQLQRSDA QKGEGDEFHM QTTKYSGSGE HGSYGPNITH HISSEGTQGP LYPTGAVSAL 420 HDKETGCIEP LPCVLPSIKT TRDQIVGRNS PPMQQADIDM FDDREGREHT HPSTSGMTDS 480 SSGSASSHPT FKKNPARPLK DKSSPALTVK ATYNGDTVRF KFLPSMGWYH LLEEIAKRFK 540 LLTGVFQLKY KDDEDEWVIM ANDSDLQECV DVMDSMGTRN VKLQVRDLPC LISSSGSSSC 600 LQLEGHNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.1 | 3e-99 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG051020.10 |