PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG050150.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 932aa    MW: 105752 Da    PI: 8.6744
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG050150.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.76.9e-22111201291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fY+++A++vGF vr+ ++k    ++ + +++++Cs +g+r+e+ k+   + +++r+r++tr+gC+a++ vk+ + ++++++++ ++HnH ++p
  TRIDC2AG050150.4 111 FYKAFAHRVGFGVRVGQQKVV--DNVVESKRYMCSSQGFRSEKVKRnvkAANKKRKREVTRCGCDAHIYVKRCSGNTYKIHSMIEQHNHGFVP 201
                       9***************99888..889****************9999787788999**********************************9875 PP
2FAR173.44.8e-23244334190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GF+vr+ ++k   +++ +  ++f+Cs+eg+r+++ k+  +e+++r+ ++tr+gC+a+++vk  + ++++v++l ++HnH l+
  TRIDC2AG050150.4 244 EFYKSYARHCGFKVRVGQHKLL-NKEVVQFKRFMCSREGFRSDKGKDpsSERKKRNVKVTRCGCNAHIVVKWCSGNTYKVSSLIEHHNHGLV 334
                       6****************99887.777799****************9987888889999*******************************986 PP
3FAR172.59.1e-23382474191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GFsvr+ + k   +n+ + +++f+Cs+eg+r+e+       +++r+ r++tr+gC+a++ vk+ +d+k+++t+  ++HnH ++
  TRIDC2AG050150.4 382 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 473
                       6****************97766.8999****************9887777889999**********************************987 PP

              FAR1  91 p 91 
                       p
  TRIDC2AG050150.4 474 P 474
                       5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 932 aa     Download sequence    
LEEEKLAFRV SCRLLGSPQG LRHTGALDPT IRAFSADSGD DPAMESVTIV QAQPFAGINS  60
PLPLDEGRLG TPERDATSMS QPCSTSTSES AEEWKPALGM TFEGLEAVEA FYKAFAHRVG  120
FGVRVGQQKV VDNVVESKRY MCSSQGFRSE KVKRNVKAAN KKRKREVTRC GCDAHIYVKR  180
CSGNTYKIHS MIEQHNHGFV PPDKLHLIRS NRGASEKEKV IPECDEALRP SLGMAFEGLS  240
SAEEFYKSYA RHCGFKVRVG QHKLLNKEVV QFKRFMCSRE GFRSDKGKDP SSERKKRNVK  300
VTRCGCNAHI VVKWCSGNTY KVSSLIEHHN HGLVLPDKVT KSKRRVSEKA KNKLSSSLAP  360
ECDEALKPSV GMVFEDIGSV EEFYKSYAHH CGFSVRVGQR KLLNNEVVQW KRFMCSREGF  420
RSEKCMGVDD PSRKRKVRKV TRCGCDARII VKRCTDNKYK ITSWIEHHNH GFVPPDKCHL  480
IRSNRQLSDK VKPTVSTHCK ASTCTSQANK PDHVSEGRSD NVGCTKRDLQ KYHHDLCSKI  540
KNEDAQIFVA QLCRKQQEDS AFFFDCDVDD QGMLVHVFWA DATSRKNYIY FSDMLTFDCT  600
NTLNQHGMIF APFTGTNHHL QSVFFGAAFL ADEKIESYAW LFQTFLRVMG GVSPKTIVTR  660
ENDRMKAAIS NVLPATTHRL CMLEMLERMP EKVEPSLRNN PLFQTRMNEC VLGSETVFEF  720
ESKWESIISD FGLQGNQWLA ERYSARERWI LAYSTDIHLS GILRSTAWSK SAKSFFNCFI  780
NQKLSLVEFW LRFEAALECQ RQEESNADHT SAHTTPQLIT PWGLEKHGSV VFTHEVFERF  840
QEEIVAARDH CVVEDMAQTE GVKTVAIGGD DSDKVREVRW DAITMTANCS CKLFESVGIP  900
CRHINLVLRS SKLNELPSSC VLKRWQKSAK FG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1433460RKRKVRKVTRCGCDARIIVKRCTDNKYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-99FAR1 family protein