PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG049080.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 417aa MW: 45771.8 Da PI: 6.3622

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG049080.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	88.6	1.1e-27	40	184	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 lp+G++F+Pt el+ e+L+ kv + + ++ + +i+e+ +i++++P++Lp +k + ++ +fF+k +++y g+rk+r+ TRIDC2AG049080.3 40 LPAGVKFDPTGLELL-EHLEGKVGRAPshnlIDDFIpTIEEAeGICYTHPENLP-GTKMDGRKSHFFHKISNAYDVGQRKRRKisnsdhvvrD 130 799**********.99**99976553333334888878******.44567899***************85676666442 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkge....ktdWvmheyrl 128 + +W++tgk+ke+ +k+g +g kk+Lv+ ++++g kt+W+mh+y+l TRIDC2AG049080.3 131 VHFRWQKTGKSKEISDKNGVIKGWKKILVLMMRSRKDGItsrtKTNWTMHQYHL 184 2567***********************655554433333*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
SSLVTTIVAV IRNPTHPPPS QIECPNCKYH IDLLSQWPGL PAGVKFDPTG LELLEHLEGK 60 VGRAPSHNLI DDFIPTIEEA EGICYTHPEN LPGTKMDGRK SHFFHKISNA YDVGQRKRRK 120 ISNSDHVVRD VHFRWQKTGK SKEISDKNGV IKGWKKILVL MMRSRKDGIT SRTKTNWTMH 180 QYHLGVDQDE KHGEPVVSKV FYQSKKDEQP VMCPVNEESD PFAGEIDTTT PMTYPPLPRP 240 PNSSPSRTEQ NQEEHAALSG PDERPSRGAT PDSVYPEMQL FPLGLDALQG LPDPRMTPGF 300 SHMASWFAGT SSYSNALENA PLSGLDECLP HGGTLDAAYP DPEGQALPLD AEALQGFPDL 360 GMPPNIFPVS APSTTAFSGA YFSILMTHLL VSCVFTAGLA VQVTGHLLGG GVLMQRP

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

SSLVTTIVAV IRNPTHPPPS QIECPNCKYH IDLLSQWPGL PAGVKFDPTG LELLEHLEGK  60
VGRAPSHNLI DDFIPTIEEA EGICYTHPEN LPGTKMDGRK SHFFHKISNA YDVGQRKRRK  120
ISNSDHVVRD VHFRWQKTGK SKEISDKNGV IKGWKKILVL MMRSRKDGIT SRTKTNWTMH  180
QYHLGVDQDE KHGEPVVSKV FYQSKKDEQP VMCPVNEESD PFAGEIDTTT PMTYPPLPRP  240
PNSSPSRTEQ NQEEHAALSG PDERPSRGAT PDSVYPEMQL FPLGLDALQG LPDPRMTPGF  300
SHMASWFAGT SSYSNALENA PLSGLDECLP HGGTLDAAYP DPEGQALPLD AEALQGFPDL  360
GMPPNIFPVS APSTTAFSGA YFSILMTHLL VSCVFTAGLA VQVTGHLLGG GVLMQRP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	142	RKRRKISNSDHVVRDVHFRWQKTGKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56620.1	8e-56	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG049080.3