PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG047600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 240aa    MW: 27514.2 Da    PI: 8.673
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG047600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.14.6e-281059251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      ri+n++ rqvtfskRrngi+KKA+EL +LCdaev ++ifsstg+lyey+s
  TRIDC2AG047600.1 10 RIDNSTSRQVTFSKRRNGIFKKAKELGILCDAEVGLVIFSSTGRLYEYAS 59
                      8***********************************************86 PP
2K-box90.53.1e-3075170398
             K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                       +++ +++ +++ + +q+e+a L+++++nLq+++R+l+G+dL+ + +keLq Le+qLe sl+ iR+kK+++l+++i+el +k   +++en++L 
  TRIDC2AG047600.1  75 EQQLVANPNSELKFWQREAASLRQQLHNLQENHRQLMGQDLSGMGVKELQALENQLEISLRCIRTKKDQILIDEIHELNHKGSLVHQENMELY 167
                       56677788999********************************************************************************** PP

             K-box  96 kkl 98 
                       kk+
  TRIDC2AG047600.1 168 KKI 170
                       *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGIFK KAKELGILCD AEVGLVIFSS TGRLYEYASS  60
SMKSVIDRYG RAKEEQQLVA NPNSELKFWQ REAASLRQQL HNLQENHRQL MGQDLSGMGV  120
KELQALENQL EISLRCIRTK KDQILIDEIH ELNHKGSLVH QENMELYKKI NLIRQENVEL  180
QKKLSETEAV TEVNRNSRTP YNFAVVEDAN VSVDLELNSP QQQNDVEHTA PPKLGLQLHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.11e-100MIKC_MADS family protein