PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG047560.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 175aa    MW: 18655.1 Da    PI: 7.8456
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG047560.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.81.4e-091445132
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                      +g+WT+eEd++l+ +++q G g+W++ +++ g
  TRIDC2AG047560.2 14 KGPWTPEEDQKLLSYIEQQGHGCWRSLPAKAG 45
                      79************************999887 PP

Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MGRSPCCEKE GLKKGPWTPE EDQKLLSYIE QQGHGCWRSL PAKAGEHPDL IQFASSCTPT  60
SSPPGCSSCI LLCYVAWVIA DMNDGKPGVI FDLQGCSGAA RAAGSGGPTT SGRTSRGASS  120
ACRRSRPSSS SMRFSATGHH PSQPIMDELS YICRLICTQN SLNSPPNYDG IWSLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.22e-22MYB family protein