PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG047560.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 185aa MW: 19589 Da PI: 10.5989

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG047560.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.7	1.5e-09	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd++l+ +++q G g+W++ +++ g TRIDC2AG047560.1 14 KGPWTPEEDQKLLSYIEQQGHGCWRSLPAKAG 45 79************************999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MGRSPCCEKE GLKKGPWTPE EDQKLLSYIE QQGHGCWRSL PAKAGEHPDL IQFASSCTPT 60 SSPPGCSSCI LLCYVAWVIA DMNDGKPGVI FDLQGCSGAA RAAGSGGPTT SGRTSRGASS 120 ACRRSRPSSS SMRFSATGGR RSRRTCPSAP TTRSRTTGTR TSRSGWPRWA STRSRTSRAP 180 TCPAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.2	2e-22	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG047560.1