PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG045600.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 404aa MW: 43280.6 Da PI: 9.6121

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG045600.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40.1	9.8e-13	76	157	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W++ + aLi+a e+ +l+rg+l+ p+W+ev++++ + +s +qCk++++ l+k+yk +++ + +++++d+l+ TRIDC2AG045600.2 76 WSEGATSALIDAWGERFVALGRGSLRHPQWQEVAEAVssrdNYSKAPKSDVQCKNRIDTLKKKYKIERAKPVS-------SWQFYDRLD 157 ***********************************84444445566889************99887765.......589998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MDDDDNSPSP SLSPASSSPL PVASALPVAD PVTVASAPPG GPLTLALPIQ KHGSYPSHGG 60 SGGGGGGGGG GREDAWSEGA TSALIDAWGE RFVALGRGSL RHPQWQEVAE AVSSRDNYSK 120 APKSDVQCKN RIDTLKKKYK IERAKPVSSW QFYDRLDVLL APTYNQKPAA HPNGRNAVPT 180 ALRAGFPQRS RTPLMPASAP VKRRAPSPEL SASSESSDGF PPEPALPAAN GKRRRTDEGR 240 VDGFSGGDRS QGMRELAQAL RRFGEAYERV ETAKLEQAAE IERQRLDFAR ELESQRVQFF 300 LNTQKELSQG KSHISPAAAA SHSQVGAATV GGSSRRMASA PDSTSRRMAP FPDARTSSNH 360 HDRYRASDGS RHHHRPAVRP HYQYHENNMA DSAAASDGEQ SGDE

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MDDDDNSPSP SLSPASSSPL PVASALPVAD PVTVASAPPG GPLTLALPIQ KHGSYPSHGG  60
SGGGGGGGGG GREDAWSEGA TSALIDAWGE RFVALGRGSL RHPQWQEVAE AVSSRDNYSK  120
APKSDVQCKN RIDTLKKKYK IERAKPVSSW QFYDRLDVLL APTYNQKPAA HPNGRNAVPT  180
ALRAGFPQRS RTPLMPASAP VKRRAPSPEL SASSESSDGF PPEPALPAAN GKRRRTDEGR  240
VDGFSGGDRS QGMRELAQAL RRFGEAYERV ETAKLEQAAE IERQRLDFAR ELESQRVQFF  300
LNTQKELSQG KSHISPAAAA SHSQVGAATV GGSSRRMASA PDSTSRRMAP FPDARTSSNH  360
HDRYRASDGS RHHHRPAVRP HYQYHENNMA DSAAASDGEQ SGDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11100.1	4e-41	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG045600.2