PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG045060.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 596aa MW: 66367.8 Da PI: 6.2132

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG045060.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.6	1.2e-23	76	177	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++ +++aee+ ++++++ ++l+ +d++g W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + TRIDC2AG045060.9 76 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RG 165 99***************************7556666.59********************************************..44 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++el+v+v+r+ TRIDC2AG045060.9 166 ENGELRVGVRRH 177 9999****96 PP
2	Auxin_resp	98.9	7.2e-33	202	287	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsd...ldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+ ++++ W +S W+sLk TRIDC2AG045060.9 202 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGStptVSTSLWADSDWKSLK 287 789************************************************************98622256678******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MEQLEASTNQ QLDQYLPMFN LPSKILCSVV NVELRTEADS DEVYAQIMLQ PEANQGELTS 60 LGPEPKELEK GTIHSFCKTL TASDTSTHGG FSVLRRHAEE CLPPLDMSQN PPCQELVAKD 120 LHGTDWHFRH IFRGQPRRHL LTTGWSVFVS SKRLVAGDAF IFLRGENGEL RVGVRRHMRQ 180 VNNMPSSVIS SHSMHLGVLA TASHAISTGT LFSVFYKPRT SQSEFVVSVN KYLEAKKQNI 240 SVGMRFKMKF EGDEALERRF SGTIIGIGST PTVSTSLWAD SDWKSLKVQW DEPSSILRPD 300 RVSPWELEPL DAANPQPPQP PLRNKRPRLP ASPSVVPELA PKFGLWKSPA EPSQTLSFSE 360 PQQARGLFTN SRFSSSSNVA FNQFYWPARE SREDSYAGST NKVTVERKLE PAAGGCRLFG 420 IEIRSAVEET QPVLTVSGDG YDQTAASVDV DSGELSQPSN MNNSGAQAAS SERALLETQS 480 RQVRSCTKVI MTGMAVGRAV DLTKLYGYVD LHRKLEEMFD IQGELCSTLK KWQVVYADEE 540 DDMMLVGDDP WDEFCNMAKR IYIYTYEEAK QLAPKAAKLS RVNSSHESAT PQSVCS

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MEQLEASTNQ QLDQYLPMFN LPSKILCSVV NVELRTEADS DEVYAQIMLQ PEANQGELTS  60
LGPEPKELEK GTIHSFCKTL TASDTSTHGG FSVLRRHAEE CLPPLDMSQN PPCQELVAKD  120
LHGTDWHFRH IFRGQPRRHL LTTGWSVFVS SKRLVAGDAF IFLRGENGEL RVGVRRHMRQ  180
VNNMPSSVIS SHSMHLGVLA TASHAISTGT LFSVFYKPRT SQSEFVVSVN KYLEAKKQNI  240
SVGMRFKMKF EGDEALERRF SGTIIGIGST PTVSTSLWAD SDWKSLKVQW DEPSSILRPD  300
RVSPWELEPL DAANPQPPQP PLRNKRPRLP ASPSVVPELA PKFGLWKSPA EPSQTLSFSE  360
PQQARGLFTN SRFSSSSNVA FNQFYWPARE SREDSYAGST NKVTVERKLE PAAGGCRLFG  420
IEIRSAVEET QPVLTVSGDG YDQTAASVDV DSGELSQPSN MNNSGAQAAS SERALLETQS  480
RQVRSCTKVI MTGMAVGRAV DLTKLYGYVD LHRKLEEMFD IQGELCSTLK KWQVVYADEE  540
DDMMLVGDDP WDEFCNMAKR IYIYTYEEAK QLAPKAAKLS RVNSSHESAT PQSVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG045060.9