PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG045060.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 165aa MW: 18291 Da PI: 11.0714 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.5 | 8.6e-12 | 6 | 51 | 52 | 99 |
.EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++++r++lt+GW+ Fv++++L +gD ++F + +++el+v+v+r+ TRIDC2AG045060.8 6 FGGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRH 51 467899**************************..449999******96 PP | |||||||
2 | Auxin_resp | 102.3 | 6e-34 | 76 | 161 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsd...ldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+ ++++ W +S W+sLk TRIDC2AG045060.8 76 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGStptVSTSLWADSDWKSLK 161 789**************************************************************98622256678********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
IFVTYFGGQP RRHLLTTGWS VFVSSKRLVA GDAFIFLRGE NGELRVGVRR HMRQVNNMPS 60 SVISSHSMHL GVLATASHAI STGTLFSVFY KPRTSQSEFV VSVNKYLEAK KQNISVGMRF 120 KMKFEGDEAL ERRFSGTIIG IGSTPTVSTS LWADSDWKSL KGPMG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.1 | 3e-85 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG045060.8 |