PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG045060.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 205aa MW: 23033.3 Da PI: 10.1414 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 77.5 | 1.4e-24 | 22 | 123 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++ +++aee+ ++++++ ++l+ +d++g W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + TRIDC2AG045060.7 22 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RG 111 99*****************************7556666.59************************************************..44 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++el+v+v+r+ TRIDC2AG045060.7 112 ENGELRVGVRRH 123 9999******96 PP | |||||||
2 | Auxin_resp | 74.9 | 2.2e-25 | 148 | 205 | 1 | 58 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserr 58 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err TRIDC2AG045060.7 148 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERR 205 789***************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
QGELTSLGPE PKELEKGTIH SFCKTLTASD TSTHGGFSVL RRHAEECLPP LDMSQNPPCQ 60 ELVAKDLHGT DWHFRHIFRG QPRRHLLTTG WSVFVSSKRL VAGDAFIFLR GENGELRVGV 120 RRHMRQVNNM PSSVISSHSM HLGVLATASH AISTGTLFSV FYKPRTSQSE FVVSVNKYLE 180 AKKQNISVGM RFKMKFEGDE ALERR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.1 | 1e-121 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG045060.7 |