PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG045060.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 514aa    MW: 57151.6 Da    PI: 7.2227
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG045060.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3352.6e-1138855099
                      E..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 50 liyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      ++++++++r++lt+GW+ Fv++++L +gD ++F   + +++el+v+v+r+
  TRIDC2AG045060.5 38 FCVSGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRH 85
                      4558899***************************..449999******96 PP
2Auxin_resp99.25.8e-33110195183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsd...ldpvrWpnSkWrsLk 83 
                       a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+     ++++ W +S W+sLk
  TRIDC2AG045060.5 110 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGStptVSTSLWADSDWKSLK 195
                       789**************************************************************98622256678********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    
MLNSYYCRNM QHILIHYFMT MCELSLPLSG SISYLTAFCV SGQPRRHLLT TGWSVFVSSK  60
RLVAGDAFIF LRGENGELRV GVRRHMRQVN NMPSSVISSH SMHLGVLATA SHAISTGTLF  120
SVFYKPRTSQ SEFVVSVNKY LEAKKQNISV GMRFKMKFEG DEALERRFSG TIIGIGSTPT  180
VSTSLWADSD WKSLKVQWDE PSSILRPDRV SPWELEPLDA ANPQPPQPPL RNKRPRLPAS  240
PSVVPELAPK FGLWKSPAEP SQTLSFSEPQ QARGLFTNSR FSSSSNVAFN QFYWPARESR  300
EDSYAGSTNK VTVERKLEPA AGGCRLFGIE IRSAVEETQP VLTVSGDGYD QTAASVDVDS  360
GELSQPSNMN NSGAQAASSE RALLETQSRQ VRSCTKVIMT GMAVGRAVDL TKLYGYVDLH  420
RKLEEMFDIQ GELCSTLKKW QVVYADEEDD MMLVGDDPWD EFCNMAKRIY IYTYEEAKQL  480
APKAAKLSRV NSSHESATPQ SGSDYPASFA NADC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein