PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG045060.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 485aa MW: 53746.5 Da PI: 6.8779

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG045060.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34.2	4.4e-11	11	56	52	99
.EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++++r++lt+GW+ Fv++++L +gD ++F + +++el+v+v+r+ TRIDC2AG045060.4 11 FGGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRH 56 467899************************..449999****96 PP
2	Auxin_resp	99.3	5.3e-33	81	166	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsd...ldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+ ++++ W +S W+sLk TRIDC2AG045060.4 81 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGStptVSTSLWADSDWKSLK 166 789************************************************************98622256678******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MELTGIFVTY FGGQPRRHLL TTGWSVFVSS KRLVAGDAFI FLRGENGELR VGVRRHMRQV 60 NNMPSSVISS HSMHLGVLAT ASHAISTGTL FSVFYKPRTS QSEFVVSVNK YLEAKKQNIS 120 VGMRFKMKFE GDEALERRFS GTIIGIGSTP TVSTSLWADS DWKSLKVQWD EPSSILRPDR 180 VSPWELEPLD AANPQPPQPP LRNKRPRLPA SPSVVPELAP KFGLWKSPAE PSQTLSFSEP 240 QQARGLFTNS RFSSSSNVAF NQFYWPARES REDSYAGSTN KVTVERKLEP AAGGCRLFGI 300 EIRSAVEETQ PVLTVSGDGY DQTAASVDVD SGELSQPSNM NNSGAQAASS ERALLETQSR 360 QVRSCTKVIM TGMAVGRAVD LTKLYGYVDL HRKLEEMFDI QGELCSTLKK WQVVYADEED 420 DMMLVGDDPW DEFCNMAKRI YIYTYEEAKQ LAPKAAKLSR VNSSHESATP QSGSDYPASF 480 ANADC

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MELTGIFVTY FGGQPRRHLL TTGWSVFVSS KRLVAGDAFI FLRGENGELR VGVRRHMRQV  60
NNMPSSVISS HSMHLGVLAT ASHAISTGTL FSVFYKPRTS QSEFVVSVNK YLEAKKQNIS  120
VGMRFKMKFE GDEALERRFS GTIIGIGSTP TVSTSLWADS DWKSLKVQWD EPSSILRPDR  180
VSPWELEPLD AANPQPPQPP LRNKRPRLPA SPSVVPELAP KFGLWKSPAE PSQTLSFSEP  240
QQARGLFTNS RFSSSSNVAF NQFYWPARES REDSYAGSTN KVTVERKLEP AAGGCRLFGI  300
EIRSAVEETQ PVLTVSGDGY DQTAASVDVD SGELSQPSNM NNSGAQAASS ERALLETQSR  360
QVRSCTKVIM TGMAVGRAVD LTKLYGYVDL HRKLEEMFDI QGELCSTLKK WQVVYADEED  420
DMMLVGDDPW DEFCNMAKRI YIYTYEEAKQ LAPKAAKLSR VNSSHESATP QSGSDYPASF  480
ANADC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG045060.4