PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG045060.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 500aa MW: 55632.6 Da PI: 7.2915

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG045060.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.7	9e-18	5	71	30	99
..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 30 keesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++ ++l+ +d++g W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + +++el+v+v+r+ TRIDC2AG045060.3 5 PPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRH 71 445.4999********************************************..449999****96 PP
2	Auxin_resp	99.2	5.5e-33	96	181	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsd...ldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+ ++++ W +S W+sLk TRIDC2AG045060.3 96 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGStptVSTSLWADSDWKSLK 181 789************************************************************98622256678******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MSQNPPCQEL VAKDLHGTDW HFRHIFRGQP RRHLLTTGWS VFVSSKRLVA GDAFIFLRGE 60 NGELRVGVRR HMRQVNNMPS SVISSHSMHL GVLATASHAI STGTLFSVFY KPRTSQSEFV 120 VSVNKYLEAK KQNISVGMRF KMKFEGDEAL ERRFSGTIIG IGSTPTVSTS LWADSDWKSL 180 KVQWDEPSSI LRPDRVSPWE LEPLDAANPQ PPQPPLRNKR PRLPASPSVV PELAPKFGLW 240 KSPAEPSQTL SFSEPQQARG LFTNSRFSSS SNVAFNQFYW PARESREDSY AGSTNKVTVE 300 RKLEPAAGGC RLFGIEIRSA VEETQPVLTV SGDGYDQTAA SVDVDSGELS QPSNMNNSGA 360 QAASSERALL ETQSRQVRSC TKVIMTGMAV GRAVDLTKLY GYVDLHRKLE EMFDIQGELC 420 STLKKWQVVY ADEEDDMMLV GDDPWDEFCN MAKRIYIYTY EEAKQLAPKA AKLSRVNSSH 480 ESATPQSGSD YPASFANADC

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MSQNPPCQEL VAKDLHGTDW HFRHIFRGQP RRHLLTTGWS VFVSSKRLVA GDAFIFLRGE  60
NGELRVGVRR HMRQVNNMPS SVISSHSMHL GVLATASHAI STGTLFSVFY KPRTSQSEFV  120
VSVNKYLEAK KQNISVGMRF KMKFEGDEAL ERRFSGTIIG IGSTPTVSTS LWADSDWKSL  180
KVQWDEPSSI LRPDRVSPWE LEPLDAANPQ PPQPPLRNKR PRLPASPSVV PELAPKFGLW  240
KSPAEPSQTL SFSEPQQARG LFTNSRFSSS SNVAFNQFYW PARESREDSY AGSTNKVTVE  300
RKLEPAAGGC RLFGIEIRSA VEETQPVLTV SGDGYDQTAA SVDVDSGELS QPSNMNNSGA  360
QAASSERALL ETQSRQVRSC TKVIMTGMAV GRAVDLTKLY GYVDLHRKLE EMFDIQGELC  420
STLKKWQVVY ADEEDDMMLV GDDPWDEFCN MAKRIYIYTY EEAKQLAPKA AKLSRVNSSH  480
ESATPQSGSD YPASFANADC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG045060.3